DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6398 and Tmem178

DIOPT Version :9

Sequence 1:NP_001285391.1 Gene:CG6398 / 32761 FlyBaseID:FBgn0030870 Length:290 Species:Drosophila melanogaster
Sequence 2:NP_080792.2 Gene:Tmem178 / 68027 MGIID:1915277 Length:297 Species:Mus musculus


Alignment Length:305 Identity:59/305 - (19%)
Similarity:100/305 - (32%) Gaps:107/305 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SAVTLSIATICAIIATALLAIAFSTDNWLHYDVWRNQIQSFAAK--------------------- 47
            :|::|.: ::|::   .||..|..||:|...|..|::.....::                     
Mouse     8 TALSLGL-SLCSL---GLLVTAIFTDHWYETDPRRHKESCERSRAGADPPDQKNRLMPLSHLPLR 68

  Fly    48 ---------------HSDAESL-----LHNMNVK-----YYYYTRTRGLFRICY--PKERPPVSA 85
                           .||.||.     |..::.:     :..|:   ||:|.||  ..:|...:.
Mouse    69 DSPPLGRRLLPGGPGRSDPESWRSLLGLGGLDAECGRPLFATYS---GLWRKCYFLGIDRDIDTL 130

  Fly    86 VPTYLSPIETHCSNIDY-FPQA--------EDEKIANEDATSRLHLARSCIALFIISFVTIFCAF 141
            :   |..|...|:.|.| |.|.        ...|...:|....|||.|.......::...:.|  
Mouse   131 I---LKGIAQRCTAIKYHFSQPIRLRNIPFNLTKTIQQDEWHLLHLRRITAGFLGMAVAVLLC-- 190

  Fly   142 WTGLSGC--------WKRSSGAITATSILLLVTCLLAAGAMGLWHTVEFFEKEKVVGEDYFQQWN 198
                 ||        |:.|.....| .:|.|:|        |::.|:........|..|.    |
Mouse   191 -----GCIVATVSFFWEESLTQHVA-GLLFLMT--------GIFCTISLCTYAASVSYDL----N 237

  Fly   199 TV------LRDNTKIAYDWSYIVAWAGIGTCLLASILLSGAAVCL 237
            .|      |..:.:..|.||...||..:|      .:::...:|:
Mouse   238 RVPKLIYSLPHDVEHGYSWSIFCAWCSLG------FIVAAGGLCI 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6398NP_001285391.1 Claudin_2 16..232 CDD:290614 55/286 (19%)
Tmem178NP_080792.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 41..86 0/44 (0%)
PMP22_Claudin 106..274 CDD:419754 42/199 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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