DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6398 and Tmem235

DIOPT Version :10

Sequence 1:NP_573244.1 Gene:CG6398 / 32761 FlyBaseID:FBgn0030870 Length:290 Species:Drosophila melanogaster
Sequence 2:NP_001079004.1 Gene:Tmem235 / 546519 MGIID:3651706 Length:211 Species:Mus musculus


Alignment Length:247 Identity:59/247 - (23%)
Similarity:96/247 - (38%) Gaps:66/247 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPCSAVTLSIATICAIIATALLAIAFSTDNWLHYDVWRNQIQSFAAKHSDAESLLHNMNVKYYYY 65
            |...|..|..|.:.|:::.||||.|.::|.|...:|            :||..|   ..|:.:.:
Mouse     1 MALLATLLLSAALGALLSFALLAAAVASDYWYILEV------------ADAGGL---GGVQLFSH 50

  Fly    66 TRTRGLFRICYPKERPPVSAVPTYLSPIETHCSNIDYFPQAEDEKIANEDATSRLHLARSCIALF 130
            :   ||:|.|..:.    |.||.           ||.|..|..|  .:......|.|.|:.:.:.
Mouse    51 S---GLWRTCEGQN----SCVPL-----------IDPFASAGLE--VSPSVQHLLSLHRTVMVVL 95

  Fly   131 IISFVTIFCAFWTGL-------------SGCWKRSSGAITATSILLLVTCLLAAGAMGLWHTVEF 182
            .:|.|.|.|.:..||             :||:....||:|...:.:.::          :..:.|
Mouse    96 PLSLVLIVCGWVCGLLSSLSQSVPLLLATGCYFLLGGALTLAGLSIYIS----------YSHLAF 150

  Fly   183 FEKEKVVGEDYFQQWNTVLRDNTKIAYDWSYIVAWAGIGTCLLASILLSGAA 234
            .|..:..|..:.|        |..|::.||..:|||...:.:|:..||..||
Mouse   151 VEAARTYGVTHVQ--------NVHISFGWSLALAWASCASEVLSGALLLAAA 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6398NP_573244.1 Claudin_2 16..232 CDD:372799 52/228 (23%)
Tmem235NP_001079004.1 Claudin_2 28..184 CDD:372799 44/208 (21%)

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