DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6398 and LOC1273601

DIOPT Version :10

Sequence 1:NP_573244.1 Gene:CG6398 / 32761 FlyBaseID:FBgn0030870 Length:290 Species:Drosophila melanogaster
Sequence 2:XP_312594.1 Gene:LOC1273601 / 1273601 VectorBaseID:AGAMI1_010325 Length:292 Species:Anopheles gambiae


Alignment Length:293 Identity:224/293 - (76%)
Similarity:249/293 - (84%) Gaps:4/293 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPCSAVTLSIATICAIIATALLAIAFSTDNWLHYDVWRNQIQSFAAKHSDAESLLHNMNVKYYYY 65
            |||||||||:|||.||||.||||||||||||..|:|.|..||:|.|||.||.:|..:.|.:..||
Mosquito     1 MPCSAVTLSLATISAIIAVALLAIAFSTDNWQSYEVKRTNIQNFIAKHPDAAALTDSFNNRLIYY 65

  Fly    66 TRTRGLFRICYPKERPPVSAVPTYLSPIETHCSNIDYFPQAEDEKIAN---EDATSRLHLARSCI 127
            ||||||||.||||||||.|:|..||||:|||||||||||..|:.|.::   :|..:|||||||.|
Mosquito    66 TRTRGLFRYCYPKERPPASSVQIYLSPVETHCSNIDYFPANEEHKESDSFTDDIMTRLHLARSVI 130

  Fly   128 ALFIISFVTIFCAFWTGLSGCWKRSSGAITATSILLLVTCLLAAGAMGLWHTVEFFEKEKVVGED 192
            |.||:|||.||||||||||||||||:||||||:||:|..|||||||||||||||||||||||||:
Mosquito   131 AAFILSFVVIFCAFWTGLSGCWKRSAGAITATAILMLTACLLAAGAMGLWHTVEFFEKEKVVGEE 195

  Fly   193 YFQQWNTVLRDNTKIAYDWSYIVAWAGIGTCLLASILLSGAAVCLRNEREKEEQLNLQYLMPVYS 257
            |:|||||||||||:::|||||||||||:...|||||||||||||||.|||||||||||||||||.
Mosquito   196 YYQQWNTVLRDNTRLSYDWSYIVAWAGVACSLLASILLSGAAVCLRGEREKEEQLNLQYLMPVYP 260

  Fly   258 QKQPPYPPYANYAQPQIYPGPYYHGSQYGPYNY 290
            |||||| ||..:.|||:||.|||||||||||||
Mosquito   261 QKQPPY-PYGGFPQPQLYPQPYYHGSQYGPYNY 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6398NP_573244.1 Claudin_2 16..232 CDD:372799 160/218 (73%)
LOC1273601XP_312594.1 Claudin_2 16..235 CDD:372799 160/218 (73%)

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