DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Socs16D and SOCS2

DIOPT Version :10

Sequence 1:NP_001259662.1 Gene:Socs16D / 32760 FlyBaseID:FBgn0030869 Length:1021 Species:Drosophila melanogaster
Sequence 2:XP_016875636.1 Gene:SOCS2 / 8835 HGNCID:19382 Length:243 Species:Homo sapiens


Alignment Length:191 Identity:57/191 - (29%)
Similarity:93/191 - (48%) Gaps:22/191 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   833 PRALQFTSSIEKVKDYGWYWGPLSSEAAEKVLSSEPDGSFIVRDSSDDHYIFSLSFKLNNCVRHV 897
            |:|.:...::.::...|||||.::...|::.|...|:|:|::||||...|:.::|.|.:....::
Human    31 PQAARLAKALRELGQTGWYWGSMTVNEAKEKLKEAPEGTFLIRDSSHSDYLLTISVKTSAGPTNL 95

  Fly   898 RIEQDQGTFSFGSYAKFKSQ-----TITEFIEKAVE---HSRSGRYLFFLHRRPEHGPMRVQLTN 954
            |||...|.|...|....||:     ::...|:..|:   ..|:|      ...|.:|.:.:.||.
Human    96 RIEYQDGKFRLDSIICVKSKLKQFDSVVHLIDYYVQMCKDKRTG------PEAPRNGTVHLYLTK 154

  Fly   955 PVSRFKHVQSLQHMCRFVILKAVIRKDLIQTLPLPRRLLDYLNYKHCYSEQVESDSSHSQI 1015
            |:  :....||||:||..|.|..   ..|..||||.||.|||..   |..||::.....::
Human   155 PL--YTSAPSLQHLCRLTINKCT---GAIWGLPLPTRLKDYLEE---YKFQVQAPVGEKEL 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Socs16DNP_001259662.1 SH2_SOCS7 839..937 CDD:198251 29/105 (28%)
SOCS_SOCS7 960..1009 CDD:239710 21/48 (44%)
SOCS2XP_016875636.1 SH2_SOCS2 40..142 CDD:198246 29/107 (27%)
SOCS_SOCS2 158..198 CDD:239705 19/45 (42%)

Return to query results.
Submit another query.