Protein Alignment Socs16D and cisha

DIOPT Version :10

• Sequence 1: NP_001259662.1
• Gene: Socs16D / 32760
• FlyBaseID: FBgn0030869
• Length: 1021
• Species: Drosophila melanogaster
• Sequence 2: NP_001070085.1
• Gene: cisha / 767678
• ZFINID: ZDB-GENE-050907-1
• Length: 212
• Species: Danio rerio
• Alignment Length: 220
• Identity: 66/220 - (30%)
• Similarity: 97/220 - (44%)
• Gaps: 40/220 - (18%)

  Fly   800 PLPKKALPFTAAAYAIEAVKSEPEEVKTNAIQEPRALQFTSSIEKVKDYGWYWGPLSSEAAEKVL 864
            |.|:..|||::....     .||.....:|.::.|||  |.:...:...|||||.:|:..|..||
Zfish     8 PSPRALLPFSSPRRI-----DEPFLTIEDASKDYRAL--TLNFSYLDASGWYWGGISASEAHSVL 65

  Fly   865 SSEPDGSFIVRDSSDDHYIFSLSFKLNNCVRHVRIEQDQGTFSFGS------------------- 910
            ....:|:|::||||...|:.:||.|......:||||..|..||..|
Zfish    66 KGASEGTFLIRDSSHPDYMLTLSVKTVRGPTNVRIEYRQCRFSLDSSSPARSHLQSFPDVHSLVQ 130

  Fly   911 -YAKFKSQTITEFIEKAVEHSRSGRYLFFLHRRPEHGPMRVQLTNPVSRFKHVQSLQHMCRFVIL 974
             |...||:...|.:|:| .|        .:...|:...:.::|..|:...:...||:|:.|.||.
Zfish   131 HYVGSKSEKNEEKMEEA-HH--------VISSAPKECSVLLKLKKPIHCPQGFPSLKHLTRLVIN 186

  Fly   975 KAVIRKDLIQTLPLPRRLLDYL-NY 998
            |.....::   ||||..||.|| ||
Zfish   187 KHTSSTEM---LPLPNPLLYYLQNY 208

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Socs16D	NP_001259662.1	SH2_SOCS7	839..937	CDD:198251	35/117 (30%)
		SOCS_SOCS7	960..1009	CDD:239710	17/40 (43%)
cisha	NP_001070085.1	SH2_CIS	46..133	CDD:198285	27/86 (31%)
		SOCS	175..212	CDD:470605	17/37 (46%)