DRSC/TRiP Functional Genomics Resources

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Protein Alignment Socs16D and Socs5

DIOPT Version :9

Sequence 1:NP_001259662.1 Gene:Socs16D / 32760 FlyBaseID:FBgn0030869 Length:1021 Species:Drosophila melanogaster
Sequence 2:NP_062628.2 Gene:Socs5 / 56468 MGIID:2385459 Length:536 Species:Mus musculus


Alignment Length:591 Identity:141/591 - (23%)
Similarity:203/591 - (34%) Gaps:183/591 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   479 QQQQQLLVEEQQQQKPAAPTYHKASRRNKRNKRK---------QRYAGSGTGAGTETSDGD---- 530
            ||:...|.|....|...:|: ...||||:....:         ::.:.||...||..:..|    
Mouse    53 QQESSPLRENVALQLGLSPS-KTFSRRNQNCAAEIPQVVEISIEKDSDSGATPGTRLARRDSYSR 116

  Fly   531 ----GEKSKHGKYRTPVGVGMGQVSESEPLHMTLDEVKQFYHTLYSDAGKPTPKPMVKSSNETIW 591
                |.|.||              |.|.....:||..|:|                         
Mouse   117 HAPWGGKKKH--------------SCSTKTQSSLDTEKKF------------------------- 142

  Fly   592 SVSTNTTTTTARTRSSVGTTRGGGGPPGAGNGAGGASSDGGVGGGSAGGGGGKYL---------- 646
                      .||||  |..|        .....|.||...:...|:...|.:.|          
Mouse   143 ----------GRTRS--GLQR--------RERRYGVSSMQDMDSVSSRAVGSRSLRQRLQDTVGL 187

  Fly   647 -------SKQNKHNLDNDKLNNNNNNNNNHQPSQQQLEKPP--------TEHH--NQHQPPNNKH 694
                   |||:|...         :|......|:..|||.|        .:.|  .||..|.:.|
Mouse   188 CFPMRTYSKQSKPLF---------SNKRKIHLSELMLEKCPFPAGSDLAQKWHLIKQHTAPVSPH 243

  Fly   695 ----------VLHSEKKSQFTLNLKQRFCSIFRFRRSNHSRCRGSGNNQTGTF-ASANANAA-AT 747
                      ::.:|.:..   .|::      |.|.|.........|.|..|| |:|..|.. ..
Mouse   244 STFFDTFDPSLVSTEDEED---RLRE------RRRLSIEEGVDPPPNAQIHTFEATAQVNPLYKL 299

  Fly   748 AP-LIPPIAVITSAPGAAGQTQLASELNGTLITAEADEPNADLRKKFQSRALPPLPKKALPFTAA 811
            .| |.|.:..|:....|..||...||.:.|.:.             .|||.     :|....:..
Mouse   300 GPKLAPGMTEISGDGSAIPQTNCDSEEDSTTLC-------------LQSRR-----QKQRQVSGD 346

  Fly   812 AYAIEAVKSEPEEVKTNA----IQEPRALQFTSSIEKVKDYGWYWGPLSSEAAEKVLSSEPDGSF 872
            ::| ...:....:|.|..    ...|..||.|.:       ..|||.:....||.:|..:|:|:|
Mouse   347 SHA-HVSRQGAWKVHTQIDYIHCLVPDLLQITGN-------PCYWGVMDRYEAEALLEGKPEGTF 403

  Fly   873 IVRDSSDDHYIFSLSFKLNNCVRHVRIEQDQGTFSFGSY--AKFKSQTITEFIEKAVEHSRSGRY 935
            ::|||:.:.|:||:||:..|...|.||||....|||.::  ..|.|.|:|..:|...:.|..   
Mouse   404 LLRDSAQEDYLFSVSFRRYNRSLHARIEQWNHNFSFDAHDPCVFHSSTVTGLLEHYKDPSSC--- 465

  Fly   936 LFFLHRRPEHGPMRVQLTNPVSRFKHVQSLQHMCRFVILKAVIRKDLIQTLPLPRRLLDYLNYKH 1000
            :||       .|:.....|....|    |||::||.||.:.. ..|.|..||||..|.|:|...|
Mouse   466 MFF-------EPLLTISLNRTFPF----SLQYICRAVICRCT-TYDGIDGLPLPSMLQDFLKEYH 518

  Fly  1001 CYSEQV 1006
             |.::|
Mouse   519 -YKQKV 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Socs16DNP_001259662.1 SH2_SOCS7 839..937 CDD:198251 33/99 (33%)
SOCS_SOCS7 960..1009 CDD:239710 19/47 (40%)
Socs5NP_062628.2 Required for interaction with IL4R 1..50
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 22..59 2/5 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 95..175 26/138 (19%)
SOCS 146..195 CDD:372221 10/58 (17%)
SH2 370..470 CDD:387587 38/116 (33%)
SOCS_SOCS5 479..534 CDD:239708 20/51 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4566
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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