DRSC/TRiP Functional Genomics Resources

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Protein Alignment Socs16D and Socs6

DIOPT Version :9

Sequence 1:NP_001259662.1 Gene:Socs16D / 32760 FlyBaseID:FBgn0030869 Length:1021 Species:Drosophila melanogaster
Sequence 2:NP_061291.2 Gene:Socs6 / 54607 MGIID:1924885 Length:533 Species:Mus musculus


Alignment Length:631 Identity:164/631 - (25%)
Similarity:244/631 - (38%) Gaps:155/631 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   421 LSSSHNSLNVSSANKPDDSIFITQAMSHDALFTREISDFYNVPIDSDIYAFPVDMIEQQQQQQLL 485
            |.:...|.|:|. :|.:....:.|..|....|.::.|.|.:        .:..||....     :
Mouse     6 LKTFRKSFNLSK-SKDETEFMVVQPQSLAGDFVKDDSLFGS--------CYGKDMASCD-----I 56

  Fly   486 VEEQQQQKPAAPTYHKASRRNKRNKRKQRYAGSGTGAGTETSDGD--GEKSKHGKYRTPVGVGMG 548
            ..|.::.|..:.:........:|...||:..|.|   ||.::|.|  ...|..|        |:.
Mouse    57 GSEDEKGKNRSKSESLMGTLKRRLSAKQKTKGKG---GTASTDEDTFSSASAPG--------GLK 110

  Fly   549 QVSESEPLHMTLDEVKQFYHTLYSDAGKPTPKPM-VKSSNETIWSVSTNTTTTTARTRSSVGTTR 612
            .|....|:..|         :|.|....|||.|: ..||.||...:.       .|.::.|    
Mouse   111 DVRAPRPIRST---------SLRSHHYSPTPWPLRPTSSEETCIKME-------MRVKALV---- 155

  Fly   613 GGGGPPGAGNGAGGASSDGGVGGGSAGGGGGKYLSKQNKHNLDNDKLNNNNNNNNNHQPSQQQLE 677
                         .|:|.|.|.|           .:::...|...:|.:            .|.|
Mouse   156 -------------HAASPGPVNG-----------VRKDLRELQPRELRD------------LQPE 184

  Fly   678 KPPTEHHNQHQPPN-----NKHV-----LHSEKKSQFTLNLKQRFCSIFRFRRSNHSRCRGSGN- 731
            ..|....:...|.:     .:||     |.|:...|:|:.|....|.:    ....|.|..:.: 
Mouse   185 PRPESRCSPSSPGDLSLHLEEHVPVVIGLMSQDYLQYTVPLDDGMCPL----EGPRSCCLDTSSP 245

  Fly   732 ---------NQTGTFASANANAAATAPLIPPIAVITSAP----GAAGQTQLASELNGTLITAEAD 783
                     ..:|.|:..:::......:.|.|.|.:|..    |..| ..|.|...|     ..|
Mouse   246 MEVSAVPLPGASGAFSEDDSHVDQDLVVGPEILVDSSVNNLLIGTTG-VMLQSPRGG-----HDD 304

  Fly   784 EP----------NADLRKKFQSRALPPL-------------PKKALPFTAAAYAIEAVKSEPEEV 825
            .|          |..:::.|...:.|.|             |..| |..|..|  ::|:|....|
Mouse   305 APPLSPLLPPMQNNPIQRNFSGLSGPDLHMAESVRCHLNFDPNSA-PGVARVY--DSVQSSGPMV 366

  Fly   826 KTNAIQEPRALQFTSSIEKVKDYGWYWGPLSSEAAEKVLSSEPDGSFIVRDSSDDHYIFSLSFKL 890
            .|:         .|..::|:...||||||::...||..|::.|||||:|||||||.|:.||||:.
Mouse   367 VTS---------LTEELKKLAKQGWYWGPITRWEAEGKLANVPDGSFLVRDSSDDRYLLSLSFRS 422

  Fly   891 NNCVRHVRIEQDQGTFSFGSYAKFKSQT-ITEFIEKAVEHSRSGRYLFFLHRRPEHGPMRVQLTN 954
            :....|.|||...|.|||......:..| |.:.||.::..|.:|.:.:...|.|......|:|||
Mouse   423 HGKTLHTRIEHSNGRFSFYEQPDVEGHTSIVDLIEHSIRDSENGAFCYSRSRLPGSATYPVRLTN 487

  Fly   955 PVSRFKHVQSLQHMCRFVILKAVIRKDLIQTLPLPRRLLDYLNYKH 1000
            |||||..|:|||::||||| :...|.||||.||||.::.|||..||
Mouse   488 PVSRFMQVRSLQYLCRFVI-RQYTRIDLIQKLPLPNKMKDYLQEKH 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Socs16DNP_001259662.1 SH2_SOCS7 839..937 CDD:198251 42/98 (43%)
SOCS_SOCS7 960..1009 CDD:239710 23/41 (56%)
Socs6NP_061291.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 54..136 23/106 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 177..199 5/33 (15%)
SH2_SOCS6 371..470 CDD:198250 42/98 (43%)
SOCS_SOCS6 493..533 CDD:239709 23/41 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 74 1.000 Domainoid score I9103
eggNOG 1 0.900 - - E1_KOG4566
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR10155
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3554
SonicParanoid 1 1.000 - - X1970
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.940

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