DRSC/TRiP Functional Genomics Resources

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Protein Alignment Socs16D and Socs7

DIOPT Version :9

Sequence 1:NP_001259662.1 Gene:Socs16D / 32760 FlyBaseID:FBgn0030869 Length:1021 Species:Drosophila melanogaster
Sequence 2:XP_006247546.3 Gene:Socs7 / 287659 RGDID:1307720 Length:642 Species:Rattus norvegicus


Alignment Length:511 Identity:146/511 - (28%)
Similarity:204/511 - (39%) Gaps:138/511 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   609 GTTRGGGG----------------PPGAGNGAG--------------------------GASSDG 631
            |....|||                ||.|...||                          ..|.:.
  Rat   136 GIKTAGGGCCPCPCPPQPPPPQPPPPAAAPQAGEDPTETSDALLVLEGLESEAESLETNSCSEEE 200

  Fly   632 GVGGGSAGGGGGKYLSKQNKHNLD------NDKLNNNNNNNNNHQPSQQQLEKPPTEHHNQHQPP 690
            ....|..||.||:.|.:.....|.      .|.:.....:....|  |||...||       .||
  Rat   201 LSSPGRGGGVGGRLLLQPPGPELPPVPFPLQDLVPPGRLSRGEQQ--QQQPPPPP-------PPP 256

  Fly   691 NNKHVLHS-EKKSQFTLNLKQRFCSIFRFRRSNHSRCRGSGNNQTGTFASANANAAATA------ 748
            .....|.. .:|..|.:.|.:    :||.:     .|.|......||....:.:.||:|      
  Rat   257 GPLRPLAGPSRKGSFKIRLSR----LFRTK-----SCNGGSGGGDGTGKRPSGDLAASAASLTDM 312

  Fly   749 -----------------------------PLI---------------------PPIAVITSAPGA 763
                                         ||.                     ||    |..|..
  Rat   313 GGSAVRELDAGRKPRLTRTQSAFSPVSFSPLFTGETVSLVDVDISQRGLTSPHPP----TPPPPP 373

  Fly   764 AGQTQLASELNGTLITAEADEPNADLRKKFQSRALPPLP----KKALPFTAAAYAIEAVKSEPEE 824
            .....|..:::|||.|:....|   :....||..|||.|    ..|.|..|...|.|::.|:|.:
  Rat   374 RRSLSLLDDISGTLPTSVLVAP---MGSSLQSFPLPPPPPPHAPDAFPRIAPIRASESLHSQPPQ 435

  Fly   825 VKTNAIQEPRALQFTSSIEKVKDYGWYWGPLSSEAAEKVLSSEPDGSFIVRDSSDDHYIFSLSFK 889
            .....:..|.:..|.:|:.:::..||||||::.|.||..|..:|||||:||||||..||.||||:
  Rat   436 HLQCPLYRPDSSSFAASLRELEKCGWYWGPMNWEDAEMKLKGKPDGSFLVRDSSDPRYILSLSFR 500

  Fly   890 LNNCVRHVRIEQDQGTFSFGSYAKF--KSQTITEFIEKAVEHSRSGRYLFFLHRR-PEHGPMRVQ 951
            ......|.|:|..:||||...:.||  :.|::.|||::|:.||::|::|:||..| |...|..||
  Rat   501 SQGITHHTRMEHYRGTFSLWCHPKFEDRCQSVVEFIKRAIMHSKNGKFLYFLRSRVPGLPPTPVQ 565

  Fly   952 LTNPVSRFKHVQSLQHMCRFVILKAVIRKDLIQTLPLPRRLLDYLNYKHCYSEQVE 1007
            |..|||||.:|:||||:|||.| :.::|.|.|..||||:.|:.|:...:.|..|.|
  Rat   566 LLYPVSRFSNVKSLQHLCRFRI-RQLVRIDHIPDLPLPKPLISYIRKFYYYDPQEE 620

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Socs16DNP_001259662.1 SH2_SOCS7 839..937 CDD:198251 45/99 (45%)
SOCS_SOCS7 960..1009 CDD:239710 21/48 (44%)
Socs7XP_006247546.3 SH2_SOCS7 450..550 CDD:198251 45/99 (45%)
SOCS_SOCS7 574..622 CDD:239710 21/48 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166339294
Domainoid 1 1.000 74 1.000 Domainoid score I8923
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006587
OrthoInspector 1 1.000 - - oto98246
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1970
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.840

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