DRSC/TRiP Functional Genomics Resources

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Protein Alignment Socs16D and socs7

DIOPT Version :9

Sequence 1:NP_001259662.1 Gene:Socs16D / 32760 FlyBaseID:FBgn0030869 Length:1021 Species:Drosophila melanogaster
Sequence 2:XP_012827004.2 Gene:socs7 / 100158657 XenbaseID:XB-GENE-969204 Length:473 Species:Xenopus tropicalis


Alignment Length:376 Identity:119/376 - (31%)
Similarity:178/376 - (47%) Gaps:79/376 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   671 PSQQQLEKPPTEHHNQHQPPNNKHVLHSEKKSQFTLNLKQRFCSIFRFRR------SNHSRCRGS 729
            |..::||: ..|.....|.|:.:  ..:.|.|     |:.|...|||.:.      :......||
 Frog   116 PEARRLEE-QEEGEAAGQAPSRR--AQNRKAS-----LRNRLSRIFRTKSCAGPPGTAERELGGS 172

  Fly   730 GNNQT----------GTFASANANAAATAPLIPPIAVITSAPGAAGQTQLASELNGTLITAEADE 784
            |.:.|          |.........:|.:|       ::.:|...|:|.       :|:      
 Frog   173 GGSLTDMSRDRELELGRKPRLTRTQSAFSP-------VSFSPLFTGETV-------SLV------ 217

  Fly   785 PNADLRKKFQSRALPPLPK----------KALPFTAAAYAIEAVKSEPEEVKTNAIQEPRALQ-- 837
             :.|:.::..|...||.|.          :.||        ..|...|.|.....:.:|  ||  
 Frog   218 -DVDISQRGSSSTHPPTPPPPPRRSLSLLEPLP--------RLVPLRPTECVPVPLVQP--LQCP 271

  Fly   838 --------FTSSIEKVKDYGWYWGPLSSEAAEKVLSSEPDGSFIVRDSSDDHYIFSLSFKLNNCV 894
                    |.:|:.:::..||||||::.|.||..|.::|||||:||||||..||.||||:.....
 Frog   272 LFKQDPSSFAASLRELEKCGWYWGPMNWEDAEMKLKAKPDGSFLVRDSSDPRYILSLSFRSQGIT 336

  Fly   895 RHVRIEQDQGTFSFGSYAKF--KSQTITEFIEKAVEHSRSGRYLFFLHRR-PEHGPMRVQLTNPV 956
            .|.|:|..:||||...:.||  :.|::.|||::|:.||::|::|:||..| |...|..|||..||
 Frog   337 HHTRMEHYRGTFSLWCHPKFEDRCQSVVEFIKRAIMHSKNGKFLYFLRSRVPGLPPTPVQLLYPV 401

  Fly   957 SRFKHVQSLQHMCRFVILKAVIRKDLIQTLPLPRRLLDYLNYKHCYSEQVE 1007
            |||.:|:||||:|||.| :.::|.|.|..||||:.|:.||...:.|..|.|
 Frog   402 SRFSNVKSLQHLCRFRI-RQLVRIDHIPELPLPKPLISYLRKFYYYDPQEE 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Socs16DNP_001259662.1 SH2_SOCS7 839..937 CDD:198251 45/99 (45%)
SOCS_SOCS7 960..1009 CDD:239710 22/48 (46%)
socs7XP_012827004.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 46 1.000 Domainoid score I11983
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006587
OrthoInspector 1 1.000 - - otm49187
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3554
SonicParanoid 1 1.000 - - X1970
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.940

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