DRSC/TRiP Functional Genomics Resources

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Protein Alignment OdsH and HB-1

DIOPT Version :10

Sequence 1:NP_523389.3 Gene:OdsH / 32758 FlyBaseID:FBgn0026058 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_174164.2 Gene:HB-1 / 839740 AraportID:AT1G28420 Length:1705 Species:Arabidopsis thaliana


Alignment Length:196 Identity:50/196 - (25%)
Similarity:78/196 - (39%) Gaps:44/196 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 DSNLGQN----DCTESSK------KRRGRTNFNSWQLRELERVFQGSHYPDIFMREALATKLDLM 198
            |:||...    |...|||      ||:.:|.|   ||..||:|:....||....|..|:.||||.
plant    18 DANLNNKKKKIDNNSSSKDGRVKPKRQMKTPF---QLETLEKVYSEEKYPSEATRAELSEKLDLS 79

  Fly   199 EGRIAVWFQNRRAKWRKQEHTKKGPGRPAHN--AHPQSCSGDPIPLSELRARELAQRSKRMKKAI 261
            :.::.:||.:||.|.:|...:.|    |..:  |..||.|.:.:|.:.....|...||       
plant    80 DRQLQMWFCHRRLKDKKDGQSNK----PVKSSVAAVQSASVNELPAAAGSVPEQDSRS------- 133

  Fly   262 DRQAKKLQDKGLE---VDYARLEAEYLAAHQEN--GVDENNWLDDDGYDD-----LHIDVVGVEP 316
                    |.|.|   ..|:.....:.:....:  .:||...:....|:.     :|..:|.:|.
plant   134 --------DSGSESGCSPYSNSRRNFASGSSSSRAELDEYETMGKPSYESRLSTMVHRAIVCIEA 190

  Fly   317 E 317
            :
plant   191 Q 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OdsHNP_523389.3 Homeodomain 159..215 CDD:459649 21/55 (38%)
HB-1NP_174164.2 Homeodomain 40..96 CDD:459649 22/58 (38%)
DDT 550..605 CDD:460696
HARE-HTH 731..799 CDD:461541
WHIM1 936..975 CDD:464774
WSD 1099..1173 CDD:464775
Blue background indicates that the domain is not in the aligned region.

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