DRSC/TRiP Functional Genomics Resources

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Protein Alignment OdsH and HB-2

DIOPT Version :9

Sequence 1:NP_523389.3 Gene:OdsH / 32758 FlyBaseID:FBgn0026058 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_193411.1 Gene:HB-2 / 827384 AraportID:AT4G16780 Length:284 Species:Arabidopsis thaliana


Alignment Length:238 Identity:57/238 - (23%)
Similarity:103/238 - (43%) Gaps:44/238 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 LNLSMDAPNPEI----SPN-SVTNSSSVYMIRQMALIQQARVAAAAVAMQQQQQQQR-----DLN 101
            |:|.::.|..:|    :|: |||.|||.:.:.:.:...::..::...:...|::.:.     |:|
plant    10 LSLGLNFPKKQINLKSNPSVSVTPSSSSFGLFRRSSWNESFTSSVPNSDSSQKETRTFIRGIDVN 74

  Fly   102 RELGMDPHSEQRIKLDSVSPTHNIHAG--SSRGIKQDPLSDEG-ADSNLGQNDCTESSKKRRGRT 163
            |......:.::...:.|.:.|.:...|  |.|....||....| :|...|.|    |.||.|   
plant    75 RPPSTAEYGDEDAGVSSPNSTVSSSTGKRSEREEDTDPQGSRGISDDEDGDN----SRKKLR--- 132

  Fly   164 NFNSWQLRELERVFQGSHYPDIFMREALATKLDLMEGRIAVWFQNRRAKWRKQEHTKKGPGRPAH 228
             .:..|...||..|:.....:...::|||.:|.|...::.||||||||: .|.:.|:        
plant   133 -LSKDQSAILEETFKDHSTLNPKQKQALAKQLGLRARQVEVWFQNRRAR-TKLKQTE-------- 187

  Fly   229 NAHPQSCSGDPIPLSELR--ARELAQRSKRMKKAI-DRQAKKL 268
                       :....||  ...|.:.::|::|.: :.:|.||
plant   188 -----------VDCEFLRRCCENLTEENRRLQKEVTELRALKL 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OdsHNP_523389.3 Homeobox 162..214 CDD:278475 17/51 (33%)
HB-2NP_193411.1 HD-ZIP_N 8..107 CDD:282474 19/96 (20%)
HOX 128..182 CDD:197696 20/58 (34%)
HALZ 184..227 CDD:128634 9/55 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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