DRSC/TRiP Functional Genomics Resources

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Protein Alignment OdsH and Rhox10

DIOPT Version :10

Sequence 1:NP_523389.3 Gene:OdsH / 32758 FlyBaseID:FBgn0026058 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_001032670.1 Gene:Rhox10 / 652926 RGDID:1563291 Length:201 Species:Rattus norvegicus


Alignment Length:137 Identity:45/137 - (32%)
Similarity:67/137 - (48%) Gaps:13/137 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 QARVAAAAVAMQQQQQQQRDLNRELGMDPHSEQRIKLDSVSPTHNIHAGSSRGIKQDPLSDEGAD 144
            |.|||||||..:..:..:  :..|||.|.|...:.|       .|....:.:..:..|...|.| 
  Rat    27 QQRVAAAAVRCRFGRGVR--VLHELGQDEHLSFKYK-------QNYSYETRKETQARPSEPEKA- 81

  Fly   145 SNLGQNDCTESSKKRRGRTNFNSWQLRELERVFQGSHYPDIFMREALATKLDLMEGRIAVWFQNR 209
              .|...| .|:.::.....|...||.|||:.||.:.|||...|:|||..:.:.|.::..||:|:
  Rat    82 --AGTAAC-RSNNRQIKHHKFTYAQLCELEKAFQETQYPDAHRRKALAALIHVDECKVKAWFKNK 143

  Fly   210 RAKWRKQ 216
            |||:||:
  Rat   144 RAKYRKK 150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OdsHNP_523389.3 Homeodomain 159..215 CDD:459649 22/55 (40%)
Rhox10NP_001032670.1 Homeodomain 99..149 CDD:459649 22/49 (45%)

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