DRSC/TRiP Functional Genomics Resources

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Protein Alignment OdsH and Drgx

DIOPT Version :10

Sequence 1:NP_523389.3 Gene:OdsH / 32758 FlyBaseID:FBgn0026058 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_001097075.2 Gene:Drgx / 5740176 FlyBaseID:FBgn0085369 Length:587 Species:Drosophila melanogaster


Alignment Length:232 Identity:71/232 - (30%)
Similarity:89/232 - (38%) Gaps:71/232 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   157 KKRRGRTNFNSWQLRELERVFQGSHYPDIFMREALATKLDLMEGRIAVWFQNRRAKWRKQEHTKK 221
            |:||.||.|...||.|||..|..:||||:|.||.||.|::|.|.|:.||||||||||||.|..| 
  Fly    51 KQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKINLTEARVQVWFQNRRAKWRKAERLK- 114

  Fly   222 GPGRPAHNAHPQSCSGDPIPLSELRARELAQRSKRMKKAIDRQAKKLQDKGLEVDYARLEAEYLA 286
                                 .|.|.||..:.|..:.|..|                        
  Fly   115 ---------------------DEQRKRENGESSSSLDKLHD------------------------ 134

  Fly   287 AHQENGVDENNWLDDDGYDDL------HIDVVGVEPEYVTGDSLDHSFCSSRTYQTKSTSSELDS 345
             .:|:..|....:||| .|||      |..:...:.|.....|..||...|     ......|||
  Fly   135 -SRESSPDITGEIDDD-MDDLPPRQRSHSPLANGQMEQQHSHSHSHSHSRS-----PGGGMHLDS 192

  Fly   346 NDMGLQGRVETPPPPQPPMQNKTLYNSPFSIESLLGS 382
            :|            .:.|:.:..|..:|.|....|||
  Fly   193 SD------------NERPLSSNQLTATPHSASQSLGS 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OdsHNP_523389.3 Homeodomain 159..215 CDD:459649 34/55 (62%)
DrgxNP_001097075.2 Homeodomain 53..109 CDD:459649 34/55 (62%)
OAR 428..446 CDD:461067
Blue background indicates that the domain is not in the aligned region.

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