DRSC/TRiP Functional Genomics Resources

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Protein Alignment OdsH and alx1

DIOPT Version :10

Sequence 1:NP_523389.3 Gene:OdsH / 32758 FlyBaseID:FBgn0026058 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_001038539.1 Gene:alx1 / 565176 ZFINID:ZDB-GENE-050419-191 Length:320 Species:Danio rerio


Alignment Length:223 Identity:74/223 - (33%)
Similarity:100/223 - (44%) Gaps:71/223 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDQLIQQLQQAAAARGQVQHPHGSSALQLYAAAAAVNMQVSGWSSVLNLSMDAPNPEISPNSVT- 64
            |||::..|.       .||:.:.:|...:.|.....|.|.|        |||..:|..:.:||| 
Zfish    22 MDQVMDTLD-------NVQYYNKASPKCVQAFPMQSNDQHS--------SMDRSSPCDNQSSVTY 71

  Fly    65 -----NSSSVYMIRQMALIQQARVAAAAVAMQQQQQQQRDLNRELGMDPHSEQRIKLDSVSPTHN 124
                 ..||::.:.....:   ||:.|.     ....:.||: |||                   
Zfish    72 CAPKSEESSLHAMENCCSL---RVSPAT-----SGPDKTDLD-ELG------------------- 108

  Fly   125 IHAGSSRGIKQDPLSDEGADSNLGQNDCTESSKKRRGRTNFNSWQLRELERVFQGSHYPDIFMRE 189
                            |..|||:      .||||||.||.|.|.||.|||:|||.:||||:::||
Zfish   109 ----------------EKCDSNV------SSSKKRRHRTTFTSAQLEELEKVFQKTHYPDVYVRE 151

  Fly   190 ALATKLDLMEGRIAVWFQNRRAKWRKQE 217
            .||.:.:|.|.|:.||||||||||||:|
Zfish   152 QLAMRTELTEARVQVWFQNRRAKWRKRE 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OdsHNP_523389.3 Homeodomain 159..215 CDD:459649 35/55 (64%)
alx1NP_001038539.1 Homeodomain 121..177 CDD:459649 35/55 (64%)
Transactivation domain. /evidence=ECO:0000250|UniProtKB:Q63087 180..320 74/223 (33%)
OAR 296..314 CDD:461067
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 300..313
Blue background indicates that the domain is not in the aligned region.

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