DRSC/TRiP Functional Genomics Resources

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Protein Alignment OdsH and phox2bb

DIOPT Version :10

Sequence 1:NP_523389.3 Gene:OdsH / 32758 FlyBaseID:FBgn0026058 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_001014818.1 Gene:phox2bb / 544654 ZFINID:ZDB-GENE-050407-3 Length:284 Species:Danio rerio


Alignment Length:152 Identity:60/152 - (39%)
Similarity:72/152 - (47%) Gaps:46/152 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 GSSRGIKQDP--------LSDEGADSNLGQNDCTESSKKRRGRTNFNSWQLRELERVFQGSHYPD 184
            |:.|..:..|        .:|.|     |.|   |..|:||.||.|.|.||:||||||..:||||
Zfish    68 GTLRDHQSSPYAAVPYKLFTDHG-----GLN---EKRKQRRIRTTFTSAQLKELERVFAETHYPD 124

  Fly   185 IFMREALATKLDLMEGRIAVWFQNRRAKWRKQEH--------TKKGPGR---------------- 225
            |:.||.||.|:||.|.|:.|||||||||:||||.        .|.|.|:                
Zfish   125 IYTREELALKIDLTEARVQVWFQNRRAKFRKQERAAAAAAAAAKNGTGKKSDSREEDSKEAKATD 189

  Fly   226 ------PAHNAHPQSCSGDPIP 241
                  |..|.:|.|..|.|.|
Zfish   190 PDSTGGPGPNPNPTSNCGGPSP 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OdsHNP_523389.3 Homeodomain 159..215 CDD:459649 37/55 (67%)
phox2bbNP_001014818.1 Homeodomain 99..155 CDD:459649 37/55 (67%)

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