DRSC/TRiP Functional Genomics Resources

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Protein Alignment OdsH and Dr

DIOPT Version :10

Sequence 1:NP_523389.3 Gene:OdsH / 32758 FlyBaseID:FBgn0026058 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_477324.1 Gene:Dr / 45285 FlyBaseID:FBgn0000492 Length:515 Species:Drosophila melanogaster


Alignment Length:406 Identity:77/406 - (18%)
Similarity:120/406 - (29%) Gaps:179/406 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 QQLQQAAAARGQVQHPHG------SSALQLYAAAAAV-----------------NMQVSGWSSVL 47
            ||.|||||.:....||..      :|.|..::.|:.:                 |:..|..:|.:
  Fly   104 QQQQQAAALQLAAVHPPAHHLHKTTSRLSNFSVASLLADTRPRTPPNQAADGPQNLTSSAATSPI 168

  Fly    48 NLSMDAPNPEISPNSVTNSSSVYMIRQMA----LIQQARVAAAAVAMQQ-------QQQQQRD-- 99
            :.:...|.|..:..:....::.:....:|    |:|.|..||||.|..|       |||||.|  
  Fly   169 SQASSTPPPPPASAAAQVPANTFHPAAVAHHAHLLQAAHAAAAAHAQHQAMAAQLRQQQQQADAR 233

  Fly   100 ----------------LNRELG-----------------MDPHSEQRIKL--------------- 116
                            |...||                 :..|::..::.               
  Fly   234 ANSPPASTSSTPSSTPLGSALGSQGNVASTPAKNERHSPLGSHTDSELEYDEEMLQDHEADHDEE 298

  Fly   117 -DSVSPTHNIHAGSSRGIKQDPLSDEG-------------------------------------- 142
             ||:....:::|..|.....|.|...|                                      
  Fly   299 EDSIVDIEDMNADDSPRSTPDGLDGSGKSLESPHGPPPGSHMQSTILSPAALASGHVPIRPTPFS 363

  Fly   143 -------ADSNLG-------------------------QNDCTESSK----------KRRGRTNF 165
                   |.:.:|                         ..|..|..:          .|:.||.|
  Fly   364 ALAAAAVAWTGMGGGVPWPGTRQMPPFGPPGMFPGAGFGGDANEPPRIKCNLRKHKPNRKPRTPF 428

  Fly   166 NSWQLRELERVFQGSHYPDIFMREALATKLDLMEGRIAVWFQNRRAKWRKQEHTK--------KG 222
            .:.||..||:.|:...|..|..|...::.|.|.|.::.:||||||||.::.:..:        .|
  Fly   429 TTQQLLSLEKKFREKQYLSIAERAEFSSSLRLTETQVKIWFQNRRAKAKRLQEAEIEKIKMAALG 493

  Fly   223 PGRP------AHNAHP 232
            .|.|      |...||
  Fly   494 RGAPGAQWAMAGYFHP 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OdsHNP_523389.3 Homeodomain 159..215 CDD:459649 23/55 (42%)
DrNP_477324.1 Homeodomain 422..478 CDD:459649 23/55 (42%)

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