DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment OdsH and toy

DIOPT Version :10

Sequence 1:NP_523389.3 Gene:OdsH / 32758 FlyBaseID:FBgn0026058 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_001368990.1 Gene:toy / 43833 FlyBaseID:FBgn0019650 Length:655 Species:Drosophila melanogaster


Alignment Length:453 Identity:97/453 - (21%)
Similarity:163/453 - (35%) Gaps:129/453 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDQLIQQLQQAAAARGQVQHPHGSSALQLYAAAAAVNMQVSGWSSVLNLSMDAPNPEISPNSVTN 65
            ::::::.|......:.|.|:......|:::      |.|..||:..             |::.|.
  Fly   148 INRVLRNLASQKEQQAQQQNESVYEKLRMF------NGQTGGWAWY-------------PSNTTT 193

  Fly    66 SSSVYMIRQMALIQQARVAAAAVAMQQQQQQQRDLNRELGMDPHSEQRIKLDSVSPTH-NIHAGS 129
            :       .:.|...|.|..:...:..|..:.....|||..           ||..:| |.|..:
  Fly   194 A-------HLTLPPAASVVTSPANLSGQADRDDVQKRELQF-----------SVEVSHTNSHDST 240

  Fly   130 SRGIKQDPLS-DEGADSNLGQNDCTESSKKRRGRTNFNSWQLRELERVFQGSHYPDIFMREALAT 193
            |.|..:...| ||.:...|     ....|.:|.||:|::.|:..||:.|:.:||||:|.||.||.
  Fly   241 SDGNSEHNSSGDEDSQMRL-----RLKRKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLAD 300

  Fly   194 KLDLMEGRIAVWFQNRRAKWRKQE---------HTKKGPGRPA---------------------- 227
            |:.|.|.||.|||.|||||||::|         .|..|.||.:                      
  Fly   301 KIGLPEARIQVWFSNRRAKWRREEKMRTQRRSADTVDGSGRTSTANNPSGTTASSSVATSNNSTP 365

  Fly   228 ------------------HNAHPQSCSGDPIPLSELRARELAQRSKRMKKAIDRQAKKLQDKGLE 274
                              .|:.|::.:|..:...|......:..|..::.|..|..   .:.|..
  Fly   366 GIVNSAINVAERTSSALVSNSLPEASNGPTVLGGEANTTHTSSESPPLQPAAPRLP---LNSGFN 427

  Fly   275 VDYARLEAEYLAAHQENGVDENNWLDD---------DGYDDLHIDVVGVEPEYVTGDSLDHSFCS 330
            ..|:.: .:.:|...||   .|:.|..         |.|..:..|.:.:...||:....:.:...
  Fly   428 TMYSSI-PQPIATMAEN---YNSSLGSMTPSCLQQRDAYPYMFHDPLSLGSPYVSAHHRNTACNP 488

  Fly   331 SRTYQ------TKSTSSELDSNDMG-LQGRVETPPPPQ-------------PPMQNKTLYNSP 373
            |..:|      ..:.||.:.|::.| :...|..|....             |.:| .:::.||
  Fly   489 SAAHQQPPQHGVYTNSSPMPSSNTGVISAGVSVPVQISTQNVSDLTGSNYWPRLQXSSIFGSP 551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OdsHNP_523389.3 Homeodomain 159..215 CDD:459649 31/55 (56%)
toyNP_001368990.1 PAX 29..153 CDD:128645 0/4 (0%)
COG5576 <253..368 CDD:227863 40/119 (34%)
Homeodomain 267..322 CDD:459649 31/54 (57%)

Return to query results.
Submit another query.