DRSC/TRiP Functional Genomics Resources

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Protein Alignment OdsH and Ubx

DIOPT Version :10

Sequence 1:NP_523389.3 Gene:OdsH / 32758 FlyBaseID:FBgn0026058 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_536752.1 Gene:Ubx / 42034 FlyBaseID:FBgn0003944 Length:389 Species:Drosophila melanogaster


Alignment Length:106 Identity:33/106 - (31%)
Similarity:47/106 - (44%) Gaps:5/106 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 LGQNDCTESSKKRRGRTNFNSWQLRELERVFQGSHYPDIFMREALATKLDLMEGRIAVWFQNRRA 211
            ||.|     ..:||||..:..:|..|||:.|..:||.....|..:|..|.|.|.:|.:||||||.
  Fly   289 LGTN-----GLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRM 348

  Fly   212 KWRKQEHTKKGPGRPAHNAHPQSCSGDPIPLSELRARELAQ 252
            |.:|:....|........|..|..:......:.::...|.|
  Fly   349 KLKKEIQAIKELNEQEKQAQAQKAAAAAAAAAAVQGGHLDQ 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OdsHNP_523389.3 Homeodomain 159..215 CDD:459649 24/55 (44%)
UbxNP_536752.1 Homeodomain 296..352 CDD:459649 24/55 (44%)

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