Protein Alignment OdsH and ems

DIOPT Version :10

• Sequence 1: NP_523389.3
• Gene: OdsH / 32758
• FlyBaseID: FBgn0026058
• Length: 382
• Species: Drosophila melanogaster
• Sequence 2: NP_731868.1
• Gene: ems / 41697
• FlyBaseID: FBgn0000576
• Length: 494
• Species: Drosophila melanogaster
• Alignment Length: 214
• Identity: 60/214 - (28%)
• Similarity: 86/214 - (40%)
• Gaps: 43/214 - (20%)

  Fly    51 MDAPNPEISPNSVTNSSSVYMIRQMALIQQARV---AAAAVAMQQQQQQQRDLNRELGMDPHSEQ 112
            ::|| ||:.|....:..:....:..|.:|...|   ||||.|             ..|:.||:.|
  Fly   296 INAP-PELPPQHNPHLIAAAQFQMAAALQAGHVLGPAAAAAA-------------AAGLPPHAAQ 346

  Fly   113 RIKLDSVSPTHNIHAGSSRGIKQDP-------LSDEG---ADSNLGQNDCTESSKKRRGRTNFNS 167
            .:              .:.|:.:|.       ||..|   .....|........|.:|.||.|:.
  Fly   347 FM--------------PNPGMARDSYQLYPWLLSRHGRIFPHRFPGSFLVPPFRKPKRIRTAFSP 397

  Fly   168 WQLRELERVFQGSHYPDIFMREALATKLDLMEGRIAVWFQNRRAKWRK--QEHTKKGPGRPAHNA 230
            .||.:||..|:.:.|.....|:|||..|:|.|.::.|||||||.|.::  ||..|.|.|....|.
  Fly   398 SQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHKRMQQEDEKGGEGGSQRNM 462

  Fly   231 HPQSCSGDPIPLSELRARE 249
            |..|...|...|.::...|
  Fly   463 HNGSGDEDDDELIDMEMDE 481

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
OdsH	NP_523389.3	Homeodomain	159..215	CDD:459649	25/55 (45%)
ems	NP_731868.1	Homeodomain	389..445	CDD:459649	25/55 (45%)