Protein Alignment OdsH and lms

DIOPT Version :10

• Sequence 1: NP_523389.3
• Gene: OdsH / 32758
• FlyBaseID: FBgn0026058
• Length: 382
• Species: Drosophila melanogaster
• Sequence 2: NP_611491.2
• Gene: lms / 37322
• FlyBaseID: FBgn0034520
• Length: 378
• Species: Drosophila melanogaster
• Alignment Length: 335
• Identity: 76/335 - (22%)
• Similarity: 115/335 - (34%)
• Gaps: 110/335 - (32%)

  Fly   128 GSSRGIKQDPLSDEGADSNL--GQNDCTESS---------KKRRGRTNFNSWQLRELERVFQGSH 181
            |:||.  ..|.:....|.|:  |::|...:|         :|:|.||.|::.|::.||..|:...
  Fly    47 GASRA--SSPATSSCLDDNMDDGKSDIDLASDDGNGLGDDRKKRPRTAFSAAQIKALETEFERGK 109

  Fly   182 YPDIFMREALATKLDLMEGRIAVWFQNRRAKWRKQ------------------------------ 216
            |..:..|.|||.:|.|.|.:|.:||||||.||:::
  Fly   110 YLSVAKRTALAKQLQLTETQIKIWFQNRRTKWKRKYTSDVETLASHYYAQLGIGGLARPMVVGDR 174

  Fly   217 ----EHTKKGP-----------GRPAHNAHPQSCSGDPI----------PLSELRARELAQ---- 252
                ..|..||           |..|..|...:.:|.|:          ||......|.|:
  Fly   175 LWLFSQTPTGPTPIQSIMLNGSGSAAPMASATTATGSPMRPYATSGGMPPLPGPSVMESARNAIL 239

  Fly   253 -RSKRMKKAIDRQAKKLQDKGLE---------------VDYAR--------LEAEYLAAHQE--- 290
             |.:.:..|:.....|....|:.               ||||.        |:.:|.....|
  Fly   240 ARGQPLNFALPFGVAKPPAGGVPAASYIPRCKPYATSYVDYAASLPTNESYLQMKYATLPPEAES 304

  Fly   291 ---NGVDENNWLDDDG----YDDLHIDVVGVEPEYVTGDSLDHSFCSSRTYQTKSTSSELDSNDM 348
               ||:.|...:..|.    .......|.|....| ..|.|:.:..|.|..|::|..|::|...:
  Fly   305 GASNGLAELERVFGDANANFLQQRSTPVAGTATAY-GHDGLNQAQRSRRPTQSESECSDIDCEHL 368

  Fly   349 GLQGRVETPP 358
               ...|.||
  Fly   369 ---DEDEEPP 375

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
OdsH	NP_523389.3	Homeodomain	159..215	CDD:459649	25/55 (45%)
lms	NP_611491.2	Cnd2	33..>106	CDD:450400	17/60 (28%)
		Homeodomain	87..143	CDD:459649	25/55 (45%)