DRSC/TRiP Functional Genomics Resources

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Protein Alignment OdsH and VSX2

DIOPT Version :10

Sequence 1:NP_523389.3 Gene:OdsH / 32758 FlyBaseID:FBgn0026058 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_878314.1 Gene:VSX2 / 338917 HGNCID:1975 Length:361 Species:Homo sapiens


Alignment Length:288 Identity:83/288 - (28%)
Similarity:116/288 - (40%) Gaps:102/288 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 QQQRDLNRELGMDPHSEQRIKLDSVSPTHNIHA-----------------GSSRGIKQDP----- 137
            |:...||:|   .|.|..|..||.::|.|.:.|                 |...|....|     
Human    35 QEILGLNKE---PPSSHPRAALDGLAPGHLLAARSVLSPAGVGGMGLLGPGGLPGFYTQPTFLEV 96

  Fly   138 LSD-----------------------------EGADSNLGQN--DCTESSKKRRGRTNFNSWQLR 171
            |||                             ..:|..:.::  :.|:..||||.||.|.|:||.
Human    97 LSDPQSVHLQPLGRASGPLDTSQTASSDSEDVSSSDRKMSKSALNQTKKRKKRRHRTIFTSYQLE 161

  Fly   172 ELERVFQGSHYPDIFMREALATKLDLMEGRIAVWFQNRRAKWRKQEHTKKGPGRPA--------- 227
            |||:.|..:||||::.||.||.|.:|.|.||.||||||||||||:|   |..||.:         
Human   162 ELEKAFNEAHYPDVYAREMLAMKTELPEDRIQVWFQNRRAKWRKRE---KCWGRSSVMAEYGLYG 223

  Fly   228 ----HNAHPQSCSGDPIPLSELRARE-----------LAQRSKRMKKAI--------DRQAKKLQ 269
                |:.        |:|.|.|::.:           |....|.::.|.        :|||....
Human   224 AMVRHSI--------PLPESILKSAKDGIMDSCAPWLLGMHKKSLEAAAESGRKPEGERQALPKL 280

  Fly   270 DKGLEVDYARLEAEYLAAHQENGVDENN 297
            || :|.|....:|:  ||..:..:.||:
Human   281 DK-MEQDERGPDAQ--AAISQEELRENS 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OdsHNP_523389.3 Homeodomain 159..215 CDD:459649 35/55 (64%)
VSX2NP_878314.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..28
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 104..151 5/46 (11%)
Homeodomain 153..205 CDD:459649 32/51 (63%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 262..300 11/40 (28%)
OAR 300..318 CDD:461067 2/6 (33%)
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 304..317 1/2 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 313..361
Blue background indicates that the domain is not in the aligned region.

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