DRSC/TRiP Functional Genomics Resources

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Protein Alignment OdsH and Arx

DIOPT Version :10

Sequence 1:NP_523389.3 Gene:OdsH / 32758 FlyBaseID:FBgn0026058 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_001093644.1 Gene:Arx / 317268 RGDID:1562672 Length:566 Species:Rattus norvegicus


Alignment Length:187 Identity:75/187 - (40%)
Similarity:92/187 - (49%) Gaps:41/187 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 SVYMIRQMALIQQARVAAAAVAMQQQQQQQRDLNRELGMDPH-SEQRIKLDSVSPTHNIHAGSSR 131
            ||.....:|....|..||||||.:..:...::   ||.:.|. :|.:...|||.    :.|||. 
  Rat   266 SVATTGTVAAAAAAAAAAAAVATEGGELSPKE---ELLLHPEDAEGKDGEDSVC----LSAGSD- 322

  Fly   132 GIKQDPLSDEGADSNLGQNDCTESSKKRRGRTNFNSWQLRELERVFQGSHYPDIFMREALATKLD 196
                   |:||          ....|:||.||.|.|:||.||||.||.:||||:|.||.||.:||
  Rat   323 -------SEEG----------LLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLD 370

  Fly   197 LMEGRIAVWFQNRRAKWRKQEHTKKG----------PGRPAHNAHPQS--CSGDPIP 241
            |.|.|:.||||||||||||:|  |.|          || |....||.|  ....|.|
  Rat   371 LTEARVQVWFQNRRAKWRKRE--KAGAQTHPPGLPFPG-PLSATHPLSPYLDASPFP 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OdsHNP_523389.3 Homeodomain 159..215 CDD:459649 38/55 (69%)
ArxNP_001093644.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 50..79
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 119..264
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 286..319 9/39 (23%)
Homeodomain 333..389 CDD:459649 38/55 (69%)
OAR 530..548 CDD:461067
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 534..547
Blue background indicates that the domain is not in the aligned region.

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