Protein Alignment OdsH and Vsx1

DIOPT Version :10

• Sequence 1: NP_523389.3
• Gene: OdsH / 32758
• FlyBaseID: FBgn0026058
• Length: 382
• Species: Drosophila melanogaster
• Sequence 2: NP_572232.2
• Gene: Vsx1 / 31470
• FlyBaseID: FBgn0263511
• Length: 837
• Species: Drosophila melanogaster
• Alignment Length: 370
• Identity: 89/370 - (24%)
• Similarity: 134/370 - (36%)
• Gaps: 113/370 - (30%)

  Fly    11 AAAARGQVQHPHGSSAL--QLYAAAAAVNMQVSGWSSVLNLSMDAPNPEISPNSVTNSSSVYMIR 73
            ::.:|.....||.|:||  ..:|||||.
  Fly   278 SSGSRSSPAGPHHSAALAAHQHAAAAAA------------------------------------- 305

  Fly    74 QMALIQQARVAAAAVAMQQQQQQQRDLNRELGMDPHSEQRIKLDSVSPTHNIHA---------GS 129
              |....|..||||........|..         .|:...:...:....|..||         |:
  Fly   306 --AAHHHAAAAAAAHHAHHAHAQAH---------AHAHAHVHAHAAHAAHAAHAHAHHAEAFLGA 359

  Fly   130 SRGIKQDP---LSDEGADSNLGQNDC----TESSKKRRGRTNFNSWQLRELERVFQGSHYPDIFM 187
            :.|...:|   |:..|.|..:|....    .:.:|:|.|||.|.|.||.|||:.|:.:||||:..
  Fly   360 AGGAGGNPNSLLAAHGGDVLVGPGGTGPGGKKKNKRRHGRTIFTSSQLEELEKAFKEAHYPDVSA 424

  Fly   188 REALATKLDLMEGRIAVWFQNRRAKWRKQEHTKKGPGRPAHNAHPQSCSGDPIPLSELRA-RELA 251
            ||.|:.|..|.|.||.||:|||||||||.|                .|.|....::|... ..:.
  Fly   425 RELLSMKTGLAEDRIQVWYQNRRAKWRKTE----------------KCWGHSTKMAEYGLYGAMV 473

  Fly   252 QRSKRMKKAIDRQAKKLQDKGLEVDYARLEAEYLAAHQENGVDENNWLDDDGYDDLHIDVVGVEP 316
            :.|..:.:.|.:.||  :|:.:        |.:|....:..::....|..|..|          .
  Fly   474 RHSLPLPETIIKSAK--EDESV--------APWLLGMHKKSLEAAELLKSDESD----------R 518

  Fly   317 EYVTGDSLDHSFCSSRTYQTKSTSSELDSNDMGLQGRV--ETPPP 359
            |..|.|..:.|:.:..|:.:..:|..:        .|:  :.|||
  Fly   519 ETPTSDDTNTSYSAGSTHNSPISSFSI--------SRLLFDAPPP 555

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
OdsH	NP_523389.3	Homeodomain	159..215	CDD:459649	33/55 (60%)
Vsx1	NP_572232.2	Homeodomain	395..452	CDD:459649	33/56 (59%)