DRSC/TRiP Functional Genomics Resources

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Protein Alignment OdsH and rx2

DIOPT Version :10

Sequence 1:NP_523389.3 Gene:OdsH / 32758 FlyBaseID:FBgn0026058 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_571301.2 Gene:rx2 / 30473 ZFINID:ZDB-GENE-990415-237 Length:327 Species:Danio rerio


Alignment Length:358 Identity:86/358 - (24%)
Similarity:139/358 - (38%) Gaps:104/358 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 VSGWSS-------VLNLSMDAPNPEISPNSVTNSSSVYMIRQMALIQQARVA----AAAVAMQQQ 93
            |||.||       :|..|.| .:|.:.|      ...:.:.:..|.:|.:..    .:.:.:..|
Zfish    29 VSGISSRVHSIDVILGFSKD-QDPLLEP------IGTHKVDEDQLEEQEKQVNSDPYSHLQIPDQ 86

  Fly    94 QQQQRDLNRELGMDPHSEQRIKLDSVSPTHNIHAGSSRGIKQDPLSDEGADSNLGQNDCTESSKK 158
            .|||:.:..:.|:  .|..:...|...|..|:.:.|    :...:.||.          ....|.
Zfish    87 TQQQQSVYHDTGL--FSTDKCDADLGDPRSNVESDS----RSPDIPDED----------QPKKKH 135

  Fly   159 RRGRTNFNSWQLRELERVFQGSHYPDIFMREALATKLDLMEGRIAVWFQNRRAKWRKQEHTKKGP 223
            ||.||.|.::||.||||.|:.|||||::.||.||.|::|.|.|:.|||||||||||:||....|.
Zfish   136 RRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQEKMDTGT 200

  Fly   224 GRPAHNAHPQSCSGDPI-----PLSELRARELAQRSKRMKKAIDRQAKKLQDKGLEVDYARLEAE 283
            .: .|::..:|.:..|:     |:|                                        
Zfish   201 MK-LHDSPIRSFNRPPMAPNVGPMS---------------------------------------- 224

  Fly   284 YLAAHQENGVDENNWLDD--DGYDDLHIDVVGVEPEYVTGDSLDHSFCSSRTYQTKSTSSELDSN 346
                   |.:..:.||..  .....:|.....:.|    |.||..::.:...:...|.       
Zfish   225 -------NSLPLDPWLSSPLSSATPMHSIPGFMGP----GQSLQPTYTAHPGFLNTSP------- 271

  Fly   347 DMGLQGRVETPPPPQPPMQNKTLYNSPFSIESL 379
              |:...::  |.|.||.|.:.::|..:.:|.:
Zfish   272 --GMMQNMQ--PMPPPPYQCQPVFNDKYPLEDV 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OdsHNP_523389.3 Homeodomain 159..215 CDD:459649 35/55 (64%)
rx2NP_571301.2 Octapeptide motif 37..44 0/6 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 48..73 5/31 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 100..139 10/52 (19%)
Homeodomain 136..192 CDD:459649 35/55 (64%)
OAR 302..316 CDD:461067
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 304..317
Nuclear localization signal. /evidence=ECO:0000255 310..314
Blue background indicates that the domain is not in the aligned region.

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