DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment OdsH and rx1

DIOPT Version :10

Sequence 1:NP_523389.3 Gene:OdsH / 32758 FlyBaseID:FBgn0026058 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_571300.2 Gene:rx1 / 30472 ZFINID:ZDB-GENE-990415-236 Length:330 Species:Danio rerio


Alignment Length:365 Identity:90/365 - (24%)
Similarity:132/365 - (36%) Gaps:114/365 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 LNLSMDAPNPEISPNSVTNSSSVYMIRQMALIQQARVAAAAVAMQQQQQQQRDLN---------- 101
            ::||:|..| .:..:.::.|:...|::....:...||.:..|.:...:.|...||          
Zfish     1 MHLSLDTMN-MVDDSCLSPSNFHDMVKAGGAVVGTRVHSIDVILGFNKDQDSLLNPGANAVAHKV 64

  Fly   102 --RELGMDPHSEQRI---------KLDSVSPT-HNIHAGSS----------RGIKQDPLSDEGAD 144
              ..||.....:||:         :..|..|| |:....|:          :.|:.|..|.:.||
Zfish    65 GGESLGEPGKLDQRVQPYGHLPPLRDGSEQPTFHDADMFSNKCDGDLGDLRKAIESDSKSPDSAD 129

  Fly   145 SNLGQNDCTESSKK--RRGRTNFNSWQLRELERVFQGSHYPDIFMREALATKLDLMEGRIAVWFQ 207
            .        |..||  ||.||.|.::||.||||.|:.|||||::.||.||.|::|.|.|:.||||
Zfish   130 G--------EQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQ 186

  Fly   208 NRRAKWRKQEHTKKGPGRPAHNAHPQSCSGDPIPLSELRARELAQRSKRMKKAIDRQAKKLQDKG 272
            |||||||:||                                          .||....||.|..
Zfish   187 NRRAKWRRQE------------------------------------------KIDASTMKLHDSP 209

  Fly   273 LEVDYARLEAEYLAAHQENGVDENNWLDDDGYDDLHIDVV--------GVEPEYVTGDSLDHSFC 329
            : :.:.|...........|.:..:.||.........:..:        |::..|.     .|||.
Zfish   210 M-LSFNRPSMHPTVGPMNNSLPLDPWLPSPLSSATPVHSIPGFMGPTQGLQTGYP-----GHSFL 268

  Fly   330 SSRTYQTKSTSSELDSNDMGLQGRVETPPPPQ--PPMQNK 367
            |             ....|....:...|||.|  ||..:|
Zfish   269 S-------------PPQPMAQSMQPMAPPPYQCPPPFTDK 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OdsHNP_523389.3 Homeodomain 159..215 CDD:459649 35/55 (64%)
rx1NP_571300.2 Octapeptide motif 37..44 1/6 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 66..104 8/37 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 118..142 10/31 (32%)
Homeodomain 138..194 CDD:459649 35/55 (64%)
OAR 302..318 CDD:461067
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 306..319
Nuclear localization signal. /evidence=ECO:0000255 312..316
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.