DRSC/TRiP Functional Genomics Resources

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Protein Alignment OdsH and otpb

DIOPT Version :10

Sequence 1:NP_523389.3 Gene:OdsH / 32758 FlyBaseID:FBgn0026058 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_571175.1 Gene:otpb / 30316 ZFINID:ZDB-GENE-990708-7 Length:328 Species:Danio rerio


Alignment Length:257 Identity:73/257 - (28%)
Similarity:102/257 - (39%) Gaps:97/257 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 GQVQHPHGSSALQLY-----AAAAAVNMQV---------SGWSSVLNLSMDA-------PNPEIS 59
            |::..|  :|.|||:     ||...|:.:.         ||....|..:.:.       |..|||
Zfish    13 GELSPP--NSGLQLHWMKDAAAELLVHREALKCRLGGTDSGHPGDLTSATETVEGTTLLPGEEIS 75

  Fly    60 PNSVTNSSSVYMIRQMALIQQARVAAAAVAMQQQQQQQRDLNRELGMDPHSEQRIKLDSVSPTHN 124
             |..:|.:.:..:.               |..|::|||::.|:..|.                  
Zfish    76 -NGGSNPNGMQQVN---------------AKDQEKQQQQNSNQTGGQ------------------ 106

  Fly   125 IHAGSSRGIKQDPLSDEGADSNLGQNDCTESSKKRRGRTNFNSWQLRELERVFQGSHYPDIFMRE 189
                                    ||    ..|::|.||.|...||.||||.|..:|||||||||
Zfish   107 ------------------------QN----QQKQKRHRTRFTPAQLNELERSFAKTHYPDIFMRE 143

  Fly   190 ALATKLDLMEGRIAVWFQNRRAKWRKQEHTK---KGPGR--PAHNAHPQ------SCSGDPI 240
            .||.::.|.|.|:.||||||||||:|::.|.   :.||.  |.|.. ||      :..||.:
Zfish   144 ELALRIGLTESRVQVWFQNRRAKWKKRKKTTNVFRAPGTLLPTHGL-PQFPSAAAAAMGDSL 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OdsHNP_523389.3 Homeodomain 159..215 CDD:459649 35/55 (64%)
otpbNP_571175.1 Homeodomain 114..164 CDD:459649 30/49 (61%)
OAR 305..323 CDD:461067
Blue background indicates that the domain is not in the aligned region.

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