DRSC/TRiP Functional Genomics Resources

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Protein Alignment OdsH and gsc

DIOPT Version :10

Sequence 1:NP_523389.3 Gene:OdsH / 32758 FlyBaseID:FBgn0026058 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_571092.1 Gene:gsc / 30212 ZFINID:ZDB-GENE-980528-2060 Length:240 Species:Danio rerio


Alignment Length:170 Identity:49/170 - (28%)
Similarity:74/170 - (43%) Gaps:52/170 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 GIKQDPLSDEGADS-----------------NLGQNDCTE--------SSKKRRGRTNFNSWQLR 171
            |.:|.|....|.||                 |:|....||        ..:|||.||.|...||.
Zfish    95 GSQQCPCIPTGYDSAGSVLISPVPHQMMSYMNVGTLSRTELQLLNQLHCRRKRRHRTIFTDEQLE 159

  Fly   172 ELERVFQGSHYPDIFMREALATKLDLMEGRIAVWFQNRRAKWRKQEHTKKGPGRPAHNAHPQSCS 236
            .||.:||.:.|||:..||.||.|:.|.|.::.|||:|||||||:|:.:                 
Zfish   160 ALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKWRRQKRS----------------- 207

  Fly   237 GDPIPLSELRARELAQRSKRMKKAIDRQAKKLQDKGLEVD 276
                      :.|.::.|::..|:....::|:::...:||
Zfish   208 ----------SSEESENSQKWNKSTKTTSEKIEEGKSDVD 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OdsHNP_523389.3 Homeodomain 159..215 CDD:459649 30/55 (55%)
gscNP_571092.1 Homeodomain 147..203 CDD:459649 30/55 (55%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 199..240 11/66 (17%)

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