DRSC/TRiP Functional Genomics Resources

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Protein Alignment OdsH and Shox2

DIOPT Version :10

Sequence 1:NP_523389.3 Gene:OdsH / 32758 FlyBaseID:FBgn0026058 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_038693.1 Gene:Shox2 / 20429 MGIID:1201673 Length:331 Species:Mus musculus


Alignment Length:121 Identity:53/121 - (43%)
Similarity:64/121 - (52%) Gaps:19/121 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 RELGMDPHSEQR----IKLDSVSPTHNIHAGSSRGIKQDPLSDEGADSNLGQNDCTESSKKRRGR 162
            |||.|......|    .:|..|||........::|     :.|||          ....|:||.|
Mouse    95 RELDMGAAERSREPGSPRLTEVSPELKDRKDDAKG-----MEDEG----------QTKIKQRRSR 144

  Fly   163 TNFNSWQLRELERVFQGSHYPDIFMREALATKLDLMEGRIAVWFQNRRAKWRKQEH 218
            |||...||.||||:|..:||||.||||.|:.:|.|.|.|:.|||||||||.||||:
Mouse   145 TNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQEN 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OdsHNP_523389.3 Homeodomain 159..215 CDD:459649 35/55 (64%)
Shox2NP_038693.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 26..140 13/59 (22%)
Homeodomain 141..197 CDD:459649 35/55 (64%)
OAR 311..327 CDD:461067
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 313..326
Blue background indicates that the domain is not in the aligned region.

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