DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment OdsH and Pitx3

DIOPT Version :10

Sequence 1:NP_523389.3 Gene:OdsH / 32758 FlyBaseID:FBgn0026058 Length:382 Species:Drosophila melanogaster
Sequence 2:XP_006526827.1 Gene:Pitx3 / 18742 MGIID:1100498 Length:388 Species:Mus musculus


Alignment Length:209 Identity:62/209 - (29%)
Similarity:95/209 - (45%) Gaps:47/209 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 WSSVLNLSMDAPNPEISPNSVTNSSSVYMIRQMALIQQARVAAAAVAMQQQQQQQRDLNRELGMD 107
            |..:..||:.|.    |.||..:.|..|.:          ....:..::.:.::||..:.|.|:.
Mouse    42 WLHMCRLSLGAH----SLNSACHCSGCYPL----------PGPPSTEIEDEIKRQRPPSMEFGLL 92

  Fly   108 PHSEQRIKLDSVSPTHNIHAGSSRGIKQDPLSDEG-----------ADSNL---GQNDCTESSKK 158
            ..:|.|      ||..::   |..|....||.:.|           |.::|   ...|.:...|:
Mouse    93 GEAEAR------SPALSL---SDAGTPHPPLPEHGCKGQEHSDSEKASASLPGGSPEDGSLKKKQ 148

  Fly   159 RRGRTNFNSWQLRELERVFQGSHYPDIFMREALATKLDLMEGRIAVWFQNRRAKWRKQEHTKKGP 223
            ||.||:|.|.||:|||..||.:.|||:..||.:|...:|.|.|:.|||:||||||||:|.:::. 
Mouse   149 RRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERSQQA- 212

  Fly   224 GRPAHNAHPQSCSG 237
                     :.|.|
Mouse   213 ---------ELCKG 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OdsHNP_523389.3 Homeodomain 159..215 CDD:459649 31/55 (56%)
Pitx3XP_006526827.1 Homeodomain 149..205 CDD:459649 31/55 (56%)
PTZ00395 <228..>322 CDD:185594
OAR 344..361 CDD:461067
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.