DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment OdsH and Pitx2

DIOPT Version :10

Sequence 1:NP_523389.3 Gene:OdsH / 32758 FlyBaseID:FBgn0026058 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_001035967.1 Gene:Pitx2 / 18741 MGIID:109340 Length:324 Species:Mus musculus


Alignment Length:323 Identity:83/323 - (25%)
Similarity:128/323 - (39%) Gaps:91/323 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 AAAVAMQQQQQQQRDLNRELGMDPHSEQRIKLDSVSPTHNIHAGSSRGIKQDPLSDEGADSNLGQ 149
            |.|:|......|.|.|:       .|:.|:::.::|.|      ||..:.:.....:|.:.::|.
Mouse    32 ALAMASVLAPGQPRSLD-------SSKHRLEVHTISDT------SSPEVAEKDKGQQGKNEDVGA 83

  Fly   150 NDCTESSKKRRGRTNFNSWQLRELERVFQGSHYPDIFMREALATKLDLMEGRIAVWFQNRRAKWR 214
            .|.::..::||.||:|.|.||:|||..||.:.|||:..||.:|...:|.|.|:.|||:|||||||
Mouse    84 EDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWR 148

  Fly   215 KQEHTKKGPGRPAHNAHPQSCSGDPIPLSELRARELAQRSKRMKKAIDRQAKKLQDKGLEVDYAR 279
            |:|          .|...:.|.....|                           |..||...|..
Mouse   149 KRE----------RNQQAELCKNGFGP---------------------------QFNGLMQPYDD 176

  Fly   280 LEAEYLAAHQENGVDENNW---------LDDDG---YDDLHIDVVGVE-----PEYVTGDSLDHS 327
            :..         |...|||         |....   ::.::::.:..:     |..::..|:..|
Mouse   177 MYP---------GYSYNNWAAKGLTSASLSTKSFPFFNSMNVNPLSSQSMFSPPNSISSMSMSSS 232

  Fly   328 FCSSRTYQTKSTSSELDS----NDM---GLQGRVETP----PPPQPPMQNKTLYNSPFSIESL 379
            ...|..  |....|.|:|    |::   .|...|.||    .||.||...:...||  |:.||
Mouse   233 MVPSAV--TGVPGSSLNSLNNLNNLSSPSLNSAVPTPACPYAPPTPPYVYRDTCNS--SLASL 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OdsHNP_523389.3 Homeodomain 159..215 CDD:459649 31/55 (56%)
Pitx2NP_001035967.1 Homeodomain 93..149 CDD:459649 31/55 (56%)
OAR 282..299 CDD:461067 5/12 (42%)

Return to query results.
Submit another query.