DRSC/TRiP Functional Genomics Resources

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Protein Alignment OdsH and ceh-36

DIOPT Version :10

Sequence 1:NP_523389.3 Gene:OdsH / 32758 FlyBaseID:FBgn0026058 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_510365.1 Gene:ceh-36 / 181529 WormBaseID:WBGene00000457 Length:257 Species:Caenorhabditis elegans


Alignment Length:171 Identity:54/171 - (31%)
Similarity:81/171 - (47%) Gaps:37/171 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   153 TESSKK--RRGRTNFNSWQLRELERVFQGSHYPDIFMREALATKLDLMEGR---IAVWFQNRRAK 212
            :||.::  ||.||:||..||.:||:||:.:.|||:..|||||..::|.:||   |.|||:|||||
 Worm    48 SESGRRAGRRERTSFNRGQLDQLEKVFRETQYPDVHRREALAKAINLPDGRVQVITVWFKNRRAK 112

  Fly   213 WR---KQEHTKKG--------------------------PGRPAHNAHPQS-CSGDPIPLSELRA 247
            .|   |.:....|                          ||.|..|||..: ...:...||:|:.
 Worm   113 DRNNKKMDGVHPGSTSSRSSNGSPHNESKPDTKSLGIHIPGTPEFNAHSAAKYEANSAVLSQLQQ 177

  Fly   248 RELAQRSKRMKKAIDRQAKKLQDKGLEVDYARLEAEYLAAH 288
            ::  |:..:..|:....:|.|.|...:...:.|.....||:
 Worm   178 QQ--QQQLQQPKSELEDSKPLADTKYDSTQSLLPQAQAAAY 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OdsHNP_523389.3 Homeodomain 159..215 CDD:459649 33/61 (54%)
ceh-36NP_510365.1 Homeodomain 56..115 CDD:459649 32/58 (55%)

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