DRSC/TRiP Functional Genomics Resources

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Protein Alignment OdsH and ceh-45

DIOPT Version :10

Sequence 1:NP_523389.3 Gene:OdsH / 32758 FlyBaseID:FBgn0026058 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_490823.1 Gene:ceh-45 / 171689 WormBaseID:WBGene00022837 Length:229 Species:Caenorhabditis elegans


Alignment Length:274 Identity:75/274 - (27%)
Similarity:103/274 - (37%) Gaps:81/274 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 LSMDAPNPEISPNSVTNSSS-------------VYMIRQMALIQQ------------ARVAAAAV 88
            ::.:..|..::|||.:.|||             ..:...:|.|.|            |..||:|:
 Worm     8 MTPETMNKLVTPNSASISSSSSSPSTSTSFSIDTLLSNPLAGIPQLHNFQDPFGAVGAAAAASAL 72

  Fly    89 AMQQQQQQQRDLNRELG--MDPHSEQRIKLDSVSPTHNIHAGSSRGIKQDPLSDEGADSNLGQND 151
            ..|.........:...|  |.|.         ::|.|:.|..|.|                    
 Worm    73 PWQFHPANYPFFSMLCGPLMPPF---------MAPYHHQHYASRR-------------------- 108

  Fly   152 CTESSKKRRGRTNFNSWQLRELERVFQGSHYPDIFMREALATKLDLMEGRIAVWFQNRRAKWRKQ 216
                  |||.||.|:..||..||..|..:||||...||.||.:..|.|.|:.|||:|||||.|||
 Worm   109 ------KRRHRTIFSEEQLNILETTFSTTHYPDATTREELAVQCSLKEERVEVWFKNRRAKERKQ 167

  Fly   217 EHTKKGPGRPAHNAHPQSCSGDPIPLSELRARELAQRSKRMKKAIDRQAKKLQDKGLEVDYARLE 281
               ||...|.:.:      |||.....|  :.|..::.||:|:.        ...|.|......:
 Worm   168 ---KKDDSRTSKH------SGDDSECDE--SDEDTRKVKRIKRE--------NSSGKETSSPESK 213

  Fly   282 AEYLAAHQENGVDE 295
            |....:|.||.|.|
 Worm   214 ASLKTSHSENLVLE 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OdsHNP_523389.3 Homeodomain 159..215 CDD:459649 29/55 (53%)
ceh-45NP_490823.1 Homeodomain 110..166 CDD:459649 29/55 (53%)

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