DRSC/TRiP Functional Genomics Resources

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Protein Alignment OdsH and hbn

DIOPT Version :10

Sequence 1:NP_523389.3 Gene:OdsH / 32758 FlyBaseID:FBgn0026058 Length:382 Species:Drosophila melanogaster
Sequence 2:XP_315326.5 Gene:hbn / 1276025 VectorBaseID:AGAMI1_011839 Length:349 Species:Anopheles gambiae


Alignment Length:197 Identity:68/197 - (34%)
Similarity:91/197 - (46%) Gaps:21/197 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 APNPEISPNSVTNSSSVYMIRQMALIQQARVAAAAVAMQQQQQQQRDLNRELGMDPHSEQRIKLD 117
            || |:.|  ::|...:||.|.|   |..........:..........:|......|..|..:|.:
Mosquito    17 AP-PQSS--AITKPRAVYSIDQ---ILGNHHHTRRTSGPNNNNNSLTINNNNNSSPDHENSLKRE 75

  Fly   118 SVSPTHNIHAGSSRGIKQD-----PLSDEGADSNLGQNDCTESSKKRRGRTNFNSWQLRELERVF 177
            . ||. .:|   ..|:..|     |:..:....:...||.....|.||.||.|.::||.:|||.|
Mosquito    76 G-SPV-EVH---DNGVDVDNDDELPIMGDIDPMDNDPNDMGRPRKIRRSRTTFTTYQLHQLERAF 135

  Fly   178 QGSHYPDIFMREALATKLDLMEGRIAVWFQNRRAKWRKQEHTKKGPGR--PAHNAHPQSCSGDPI 240
            :.:.|||:|.||.||.:|||.|.|:.||||||||||||:|   |..||  .|...|.|.....|:
Mosquito   136 EKTQYPDVFTREELAMRLDLSEARVQVWFQNRRAKWRKRE---KAMGRDTSAFLHHEQGMPEFPL 197

  Fly   241 PL 242
            .|
Mosquito   198 AL 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OdsHNP_523389.3 Homeodomain 159..215 CDD:459649 34/55 (62%)
hbnXP_315326.5 None

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