DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment OdsH and Arx

DIOPT Version :10

Sequence 1:NP_523389.3 Gene:OdsH / 32758 FlyBaseID:FBgn0026058 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_031518.2 Gene:Arx / 11878 MGIID:1097716 Length:564 Species:Mus musculus


Alignment Length:343 Identity:96/343 - (27%)
Similarity:141/343 - (41%) Gaps:119/343 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 QLIQQLQQAAAA----------------RGQVQHP---------HGSSALQLYAAAAAVNMQVSG 42
            :|:|....||||                ||:|..|         ...||..:.|||||     :.
Mouse    95 RLLQGAAAAAAAAAAAAAAATATGTAGPRGEVPPPPPPAARPGERQDSAGAVAAAAAA-----AA 154

  Fly    43 WSSVLNLSMDAPNPEIS-PNSVTNSSSVYMIRQMALIQ----------QARVAAAA--------- 87
            |.: |.:| .||...|| ..|...:.:.::....||.:          :.|::||:         
Mouse   155 WDT-LKIS-QAPQVSISRSKSYRENGAPFVPPPPALDELSGPGGVAHPEERLSAASGPGSAPAAG 217

  Fly    88 ------------VAMQQQQQQQRDLNRELGMDPHSEQRIKLD-----------SVSPTHNIHAG- 128
                        :..::.::::.:|     ::...|:.::.|           ||:.|..:.|. 
Mouse   218 GGTGAEDDEEELLEDEEDEEEEEEL-----LEDDDEELLEDDARALLKEPRRCSVATTGTVAAAA 277

  Fly   129 -------SSRGIKQDP-----LSDEGADSNLGQNDCTESS-----------KKRRGRTNFNSWQL 170
                   ::.|.:..|     |..|.|:...|::....|:           |:||.||.|.|:||
Mouse   278 AAAAAAVATEGGELSPKEELLLHPEDAEGKDGEDSVCLSAGSDSEEGLLKRKQRRYRTTFTSYQL 342

  Fly   171 RELERVFQGSHYPDIFMREALATKLDLMEGRIAVWFQNRRAKWRKQEHTKKG----------PGR 225
            .||||.||.:||||:|.||.||.:|||.|.|:.||||||||||||:|  |.|          || 
Mouse   343 EELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNRRAKWRKRE--KAGAQTHPPGLPFPG- 404

  Fly   226 PAHNAHPQS--CSGDPIP 241
            |....||.|  ....|.|
Mouse   405 PLSATHPLSPYLDASPFP 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OdsHNP_523389.3 Homeodomain 159..215 CDD:459649 38/55 (69%)
ArxNP_031518.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 54..79
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 111..264 27/164 (16%)
Homeodomain 331..387 CDD:459649 38/55 (69%)
OAR 528..546 CDD:461067
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 532..545
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.