DRSC/TRiP Functional Genomics Resources

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Protein Alignment OdsH and arx

DIOPT Version :10

Sequence 1:NP_523389.3 Gene:OdsH / 32758 FlyBaseID:FBgn0026058 Length:382 Species:Drosophila melanogaster
Sequence 2:XP_002933659.1 Gene:arx / 100486727 XenbaseID:XB-GENE-483940 Length:536 Species:Xenopus tropicalis


Alignment Length:202 Identity:73/202 - (36%)
Similarity:95/202 - (47%) Gaps:35/202 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 DAPNPEISPNSVTNSSSVYMIRQMALIQQARVAAAAVAMQQQQQQQRDLNRELGMDPHSEQRIKL 116
            |..|.:.:||:.:|.:..::..|.....|::       ..||||.......:..:.|..|..:  
 Frog   215 DEANKQHNPNNSSNPNRAHLQEQQHPQFQSQ-------QSQQQQPPPGCGTDAELSPKEELML-- 270

  Fly   117 DSVSPTHNIHAGSSRGIKQDPLSDEGADSNLGQNDCTESSKKRRGRTNFNSWQLRELERVFQGSH 181
                  |:..|....|.....|| .|:||..|.    ...|:||.||.|.|:||.||||.||.:|
 Frog   271 ------HSSDADGKDGEDSVCLS-AGSDSEEGM----LKRKQRRYRTTFTSYQLEELERAFQKTH 324

  Fly   182 YPDIFMREALATKLDLMEGRIAVWFQNRRAKWRKQEHTKKG----------PGRPAHNAHPQS-- 234
            |||:|.||.||.:|||.|.|:.||||||||||||:|  |.|          || |...:||..  
 Frog   325 YPDVFTREELAMRLDLTEARVQVWFQNRRAKWRKRE--KAGAQTHAPGLPFPG-PLSASHPLGPY 386

  Fly   235 CSGDPIP 241
            ....|.|
 Frog   387 LDASPFP 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OdsHNP_523389.3 Homeodomain 159..215 CDD:459649 38/55 (69%)
arxXP_002933659.1 Homeodomain 302..358 CDD:459649 38/55 (69%)
OAR 500..518 CDD:461067
Blue background indicates that the domain is not in the aligned region.

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