Protein Alignment OdsH and shox

DIOPT Version :10

• Sequence 1: NP_523389.3
• Gene: OdsH / 32758
• FlyBaseID: FBgn0026058
• Length: 382
• Species: Drosophila melanogaster
• Sequence 2: XP_004911874.1
• Gene: shox / 100486480
• XenbaseID: XB-GENE-920752
• Length: 334
• Species: Xenopus tropicalis
• Alignment Length: 218
• Identity: 74/218 - (33%)
• Similarity: 101/218 - (46%)
• Gaps: 56/218 - (25%)

  Fly   102 RELGMDPHSEQRIKLDSVSPTHN---IHAGSSRGI--KQDPLSDEGADS-NLGQNDCTESS---- 156
            ||||   :||  ..|..::.|.|   :|.....|.  .:|.|.|.|:.. :.|..:|.|..
 Frog    85 RELG---NSE--TNLQDITDTSNHCPLHLYKEHGADSDKDKLKDYGSTRVSEGIYECKEKRDDVK 144

  Fly   157 ----------KKRRGRTNFNSWQLRELERVFQGSHYPDIFMREALATKLDLMEGRIAVWFQNRRA 211
                      |:||.||||...||.||||:|..:||||.||||.|:.:|.|.|.|:.||||||||
 Frog   145 SEDEDGQTKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRA 209

  Fly   212 KWRKQEHT--KKGPG-RPAHNAHPQSCSGDP--------IPLSELRARELAQRSKRMKKAIDRQA 265
            |.||||:.  |.|.| .....:|.::|...|        :|..:::|
 Frog   210 KCRKQENQMHKGGYGVILGTGSHLETCRVAPYVNMGALRMPFQQVQA------------------ 256

  Fly   266 KKLQDKGLEVDYARLEAEYLAAH 288
             :||.:|:...:..|. .:||||
 Frog   257 -QLQLEGVAHAHPHLH-PHLAAH 277

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
OdsH	NP_523389.3	Homeodomain	159..215	CDD:459649	35/55 (64%)
shox	XP_004911874.1	Homeodomain	157..213	CDD:459649	35/55 (64%)
		OAR	314..330	CDD:461067