DRSC/TRiP Functional Genomics Resources

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Protein Alignment OdsH and pax10

DIOPT Version :10

Sequence 1:NP_523389.3 Gene:OdsH / 32758 FlyBaseID:FBgn0026058 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_001373372.1 Gene:pax10 / 100192208 ZFINID:ZDB-GENE-081022-10 Length:275 Species:Danio rerio


Alignment Length:274 Identity:73/274 - (26%)
Similarity:102/274 - (37%) Gaps:87/274 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 DSVSPTH---------NIH-AGSSRGIKQDPLSDEGADSNLGQNDCTESSKKRRGRTNFNSWQLR 171
            |:::|.|         |:. ||:..|:.|.. .||..||.|   ......|.:|.||:|...|:.
Zfish    27 DTITPQHGTDGCVEDLNVQMAGAGEGVVQGE-RDEVDDSQL---HLQLKRKLQRNRTSFTQEQID 87

  Fly   172 ELERVFQGSHYPDIFMREALATKLDLMEGRIAVWFQNRRAKWRKQEHTKKGPGRPAHNAHPQSCS 236
            .||:.|:.:||||:|.||.||.|:||.|.||.|||.|||||||::|..:    ....:....|||
Zfish    88 ALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLR----NQRRSGSSSSCS 148

  Fly   237 GDPIPLSELRARELAQRSKRMKKAIDRQAKKLQDKGLEVDYARLEAEYLAAHQENGVDENNWLDD 301
            ....|||                                  ....:....:|..|.....:...|
Zfish   149 QTHTPLS----------------------------------TSFNSPVYHSHHSNSSGSMHSRSD 179

  Fly   302 ---DGYDDLHIDVVGVEPEYVTGDSLDHSFCSSRTYQTKSTSSELDSNDMGLQGRVETPPPPQ-- 361
               .||..|.:                  |.|.::..::||.:.          ....||.|.  
Zfish   180 SSLSGYSSLSV------------------FSSMQSLPSQSTPTY----------SCMLPPSPSAL 216

  Fly   362 PPMQNK--TLYNSP 373
            ||:..|  :.|.||
Zfish   217 PPLSRKFDSSYTSP 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OdsHNP_523389.3 Homeodomain 159..215 CDD:459649 32/55 (58%)
pax10NP_001373372.1 Homeodomain 76..131 CDD:459649 32/54 (59%)

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