DRSC/TRiP Functional Genomics Resources

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Protein Alignment OdsH and sia1

DIOPT Version :10

Sequence 1:NP_523389.3 Gene:OdsH / 32758 FlyBaseID:FBgn0026058 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_001090821.1 Gene:sia1 / 100038038 XenbaseID:XB-GENE-482368 Length:240 Species:Xenopus tropicalis


Alignment Length:253 Identity:65/253 - (25%)
Similarity:100/253 - (39%) Gaps:67/253 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 SSALQL---YAAAAAVNMQVSGWSSVLNLSMDAPNPEISPNSVTNSSSVYMIRQMALIQQARVAA 85
            |:||.|   |......|..::..:.::.:..|. :|.:..|...:       |...::|:..|..
 Frog    12 STALTLQEDYIKFTPRNPTMACHTEIIGVFHDI-HPTVEKNKEAH-------RDKLVLQETLVEL 68

  Fly    86 AAV-AMQQQQQQQRDLNRELGMDPHSEQRIKLDSVSPTHNIHAGSSRGIKQDPL----------- 138
            .:| .:.|:.|..:.:..|   :|  ||             |.||:|   .|||           
 Frog    69 YSVLGIPQEPQVGKTMKFE---EP--EQ-------------HRGSAR---FDPLVNSLQLKRPLY 112

  Fly   139 SDEGADSN--LGQND---CTESSKKRRGRTNFNSWQLRELERVFQGSHYPDIFMREALATKLDLM 198
            .:|..:..  |.|.|   ...|::.|| ||.::..|...|:..|..:.|||...|..:|....:.
 Frog   113 EEERRECKRPLVQADEAVAAPSARSRR-RTIYSKEQTHFLQNQFDLNPYPDFVNRCRIAKITAIP 176

  Fly   199 EGRIAVWFQNRRAKWRKQEHT------KKGPG---------RPAHNAHPQSCSGDPIP 241
            |.||.||||||||:...:..|      :|.||         |.|.  ||::.|...||
 Frog   177 EPRIQVWFQNRRARHLPRAATSLSPQERKPPGSVGPRSSLCREAQ--HPEAWSEVLIP 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OdsHNP_523389.3 Homeodomain 159..215 CDD:459649 23/55 (42%)
sia1NP_001090821.1 Homeodomain 138..191 CDD:459649 23/53 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 193..240 11/42 (26%)

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