DRSC/TRiP Functional Genomics Resources

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Protein Alignment unc-4 and SHOX2

DIOPT Version :10

Sequence 1:NP_573242.2 Gene:unc-4 / 32757 FlyBaseID:FBgn0024184 Length:588 Species:Drosophila melanogaster
Sequence 2:NP_003021.3 Gene:SHOX2 / 6474 HGNCID:10854 Length:355 Species:Homo sapiens


Alignment Length:106 Identity:51/106 - (48%)
Similarity:63/106 - (59%) Gaps:2/106 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   198 TVATIQHRLMIGNRQSLPPAGPPSEGSNEDGGFPGDGDDDSSAAKRRRSRTNFNSWQLEELERAF 262
            |.|.:|..|::..........|..:...||.  .|..|:..:..|:|||||||...||.||||.|
Human   121 TKAEVQATLLLPGEAFRFLVSPELKDRKEDA--KGMEDEGQTKIKQRRSRTNFTLEQLNELERLF 183

  Fly   263 SASHYPDIFMREALAMRLDLKESRVAVWFQNRRAKVRKREH 303
            ..:||||.||||.|:.||.|.|:||.|||||||||.||:|:
Human   184 DETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQEN 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unc-4NP_573242.2 Homeodomain 244..300 CDD:459649 38/55 (69%)
SHOX2NP_003021.3 Homeodomain 165..221 CDD:459649 38/55 (69%)
OAR 335..351 CDD:461067
Blue background indicates that the domain is not in the aligned region.

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