DRSC/TRiP Functional Genomics Resources

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Protein Alignment unc-4 and crx

DIOPT Version :10

Sequence 1:NP_573242.2 Gene:unc-4 / 32757 FlyBaseID:FBgn0024184 Length:588 Species:Drosophila melanogaster
Sequence 2:NP_001016021.1 Gene:crx / 548775 XenbaseID:XB-GENE-478452 Length:290 Species:Xenopus tropicalis


Alignment Length:110 Identity:43/110 - (39%)
Similarity:64/110 - (58%) Gaps:18/110 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   229 GFPGDGDDDSSAAKRRRSRTNFNSWQLEELERAFSASHYPDIFMREALAMRLDLKESRVAVWFQN 293
            |:|      ::..|:||.||.|...||:.||..|:.:.||||||||.:|::::|.||||.|||:|
 Frog    30 GYP------TTPRKQRRERTTFTRAQLDILEALFAKTRYPDIFMREEVALKINLPESRVQVWFKN 88

  Fly   294 RRAKVRKREHTKKGPGRP-----------AHNAQPQTCSGEPIPP 327
            ||||.|:::....|..:|           ..|::..| :|:..||
 Frog    89 RRAKCRQQQQQSTGQAKPRPAKKKTSPARETNSEAST-NGQYSPP 132

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unc-4NP_573242.2 Homeodomain 244..300 CDD:459649 32/55 (58%)
crxNP_001016021.1 Homeodomain 39..94 CDD:459649 32/54 (59%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 93..144 8/41 (20%)
TF_Otx 152..236 CDD:427350
Blue background indicates that the domain is not in the aligned region.

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