DRSC/TRiP Functional Genomics Resources

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Protein Alignment unc-4 and Dr

DIOPT Version :10

Sequence 1:NP_573242.2 Gene:unc-4 / 32757 FlyBaseID:FBgn0024184 Length:588 Species:Drosophila melanogaster
Sequence 2:NP_477324.1 Gene:Dr / 45285 FlyBaseID:FBgn0000492 Length:515 Species:Drosophila melanogaster


Alignment Length:494 Identity:102/494 - (20%)
Similarity:148/494 - (29%) Gaps:225/494 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 TNNNNSSASRNNNSHN---NNNNNHSPKEIPEETGRSSSTSSNSIPNAHRTNAGQHLL------- 69
            ::|:.|::..|.:|.|   :|..|.||.........:|.||.:::..||:    ||||       
  Fly    40 SSNSGSNSGSNMSSGNMTSSNLTNLSPSHPAGLNALASPTSPSALLLAHQ----QHLLQQHQQHQ 100

  Fly    70 --GGSPSSACSTSVSGCGMPSEGLHPTAA-LQLYAAAAQLAPNGVRVPPWGPFLQFGVPGVFGPN 131
              ......|.:..::....|:..||.|.: |..::.|:.||....|.|               ||
  Fly   101 QQQQQQQQAAALQLAAVHPPAHHLHKTTSRLSNFSVASLLADTRPRTP---------------PN 150

  Fly   132 GPFLGRPRFDAASAGGHPNSAAA-------AAAATQMAAVNASNAF--------ANLTGLSAAAL 181
            ....| |:...:||...|.|.|:       |:||.|:.|    |.|        |:|  |.||..
  Fly   151 QAADG-PQNLTSSAATSPISQASSTPPPPPASAAAQVPA----NTFHPAAVAHHAHL--LQAAHA 208

  Fly   182 RNVSAAQTTAVAA--------------------------------------VASTVATIQHRLMI 208
            ...:.||..|:||                                      ||||.|..:....:
  Fly   209 AAAAHAQHQAMAAQLRQQQQQADARANSPPASTSSTPSSTPLGSALGSQGNVASTPAKNERHSPL 273

  Fly   209 GNR-------------------------------------------------------------- 211
            |:.                                                              
  Fly   274 GSHTDSELEYDEEMLQDHEADHDEEEDSIVDIEDMNADDSPRSTPDGLDGSGKSLESPHGPPPGS 338

  Fly   212 ----------------------------------------------QSLPPAGPPSEGSNEDGGF 230
                                                          :.:||.|||       |.|
  Fly   339 HMQSTILSPAALASGHVPIRPTPFSALAAAAVAWTGMGGGVPWPGTRQMPPFGPP-------GMF 396

  Fly   231 PGDG-DDDSSAAKR-----------RRSRTNFNSWQLEELERAFSASHYPDIFMREALAMRLDLK 283
            ||.| ..|::...|           |:.||.|.:.||..||:.|....|..|..|...:..|.|.
  Fly   397 PGAGFGGDANEPPRIKCNLRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLRLT 461

  Fly   284 ESRVAVWFQNRRAKVRKREHTK------KGPGRPAHNAQ 316
            |::|.:||||||||.::.:..:      ...||.|..||
  Fly   462 ETQVKIWFQNRRAKAKRLQEAEIEKIKMAALGRGAPGAQ 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unc-4NP_573242.2 Homeodomain 244..300 CDD:459649 24/55 (44%)
DrNP_477324.1 Homeodomain 422..478 CDD:459649 24/55 (44%)

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