DRSC/TRiP Functional Genomics Resources

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Protein Alignment unc-4 and ems

DIOPT Version :10

Sequence 1:NP_573242.2 Gene:unc-4 / 32757 FlyBaseID:FBgn0024184 Length:588 Species:Drosophila melanogaster
Sequence 2:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster


Alignment Length:326 Identity:83/326 - (25%)
Similarity:111/326 - (34%) Gaps:115/326 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 PKEIPEETGRSSSTSSNSIPNAHRTNAGQHLLGGSPSSACSTSVSGCGMPSEGLHPTAALQLYAA 102
            ||.:..::.:.||:.:..|.:.|.|...|......|:                         |..
  Fly   205 PKSVSPQSSQPSSSPTLLISSPHATPPQQQQQQPPPN-------------------------YPK 244

  Fly   103 AAQLAPNGVRVPPWGPFLQFGVPGV-------FGPNGPFL--GRPRFDAASA-----GGHP---- 149
            .|.:.|.|.     ||.:..|:|..       .||.||.:  |:|......|     ...|    
  Fly   245 PAMMHPGGA-----GPMMMPGMPPAGLVRPFPMGPGGPPMPQGQPGLPDIKALPPYINAPPELPP 304

  Fly   150 --NSAAAAAAATQMAAVNASNAFANLTGLSAAALRNVSAAQTTAVAAVASTVATIQHRLMIGNRQ 212
              |....|||..||||.                   :.|......||.|:..|            
  Fly   305 QHNPHLIAAAQFQMAAA-------------------LQAGHVLGPAAAAAAAA------------ 338

  Fly   213 SLPPAGP---PSEGSNEDG-----------------GFPGDGDDDSSAA----KRRRSRTNFNSW 253
            .|||...   |:.|...|.                 .|||     |...    |.:|.||.|:..
  Fly   339 GLPPHAAQFMPNPGMARDSYQLYPWLLSRHGRIFPHRFPG-----SFLVPPFRKPKRIRTAFSPS 398

  Fly   254 QLEELERAFSASHYPDIFMREALAMRLDLKESRVAVWFQNRRAKVRK--REHTKKGPG---RPAH 313
            ||.:||.||.::.|.....|:|||..|:|.|::|.|||||||.|.::  :|..|.|.|   |..|
  Fly   399 QLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHKRMQQEDEKGGEGGSQRNMH 463

  Fly   314 N 314
            |
  Fly   464 N 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unc-4NP_573242.2 Homeodomain 244..300 CDD:459649 27/55 (49%)
emsNP_731868.1 Homeodomain 389..445 CDD:459649 27/55 (49%)

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