DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment unc-4 and lab

DIOPT Version :10

Sequence 1:NP_573242.2 Gene:unc-4 / 32757 FlyBaseID:FBgn0024184 Length:588 Species:Drosophila melanogaster
Sequence 2:NP_476613.1 Gene:lab / 40817 FlyBaseID:FBgn0002522 Length:629 Species:Drosophila melanogaster


Alignment Length:349 Identity:83/349 - (23%)
Similarity:118/349 - (33%) Gaps:92/349 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 NNSHNNNNNNHSPKEIPEETGRSSSTSSNSIPNAHRTNA-------GQHLLGG--SPSSACSTSV 81
            ||.|.........::.|.:..:.....|.:....|..|:       .:...||  ||.|:.|:|.
  Fly   303 NNPHQQQPQVQQQQQQPHQQPQHPQNQSPAAHQQHHQNSVSPNGGMNRQQRGGVISPGSSTSSST 367

  Fly    82 SGCGMPSEGLHPTAALQLYAAAAQLAPNGVRVPPWGPFLQF--GVPGVFGPNGPFLG-------- 136
            |.    |.|.||       |:....:||.....|...::|.  .||....|..|..|        
  Fly   368 SA----SNGAHP-------ASTQSKSPNHSSSIPTYKWMQLKRNVPKPQAPKLPASGIASMHDYQ 421

  Fly   137 -RPRFDAASAGGHPNSAAAAAAATQMAAVNASNAFANLTGLSAAALRNVSAAQTTAVAAVASTVA 200
             ..:.|....||...|             ...|....:.|..:..:..|.:.|.:.:.|.::..|
  Fly   422 MNGQLDMCRGGGGGGS-------------GVGNGPVGVGGNGSPGIGGVLSVQNSLIMANSAAAA 473

  Fly   201 TIQHRLMIGNRQSLPPAGPPSEGSNEDGGFPGDGDDDSSAA----KRRRSRTNFNSWQLEELERA 261
            ...|                   .|..|...|.|...||.:    .....||||.:.||.|||:.
  Fly   474 GSAH-------------------PNGMGVGLGSGSGLSSCSLSSNTNNSGRTNFTNKQLTELEKE 519

  Fly   262 FSASHYPDIFMREALAMRLDLKESRVAVWFQNRRAKVRKREHTKKG--PG-------------RP 311
            |..:.|.....|..:|..|.|.|::|.:||||||.|.:||  .|:|  |.             :|
  Fly   520 FHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQKKR--VKEGLIPADILTQHSTSVISEKP 582

  Fly   312 AHNAQPQTCSGEPIPPNELKAKER 335
            ....|||        |.||:.|.:
  Fly   583 PQQQQPQ--------PPELQLKSQ 598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unc-4NP_573242.2 Homeodomain 244..300 CDD:459649 24/55 (44%)
labNP_476613.1 Homeodomain 505..558 CDD:459649 24/52 (46%)

Return to query results.
Submit another query.