DRSC/TRiP Functional Genomics Resources

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Protein Alignment unc-4 and prrx1a

DIOPT Version :10

Sequence 1:NP_573242.2 Gene:unc-4 / 32757 FlyBaseID:FBgn0024184 Length:588 Species:Drosophila melanogaster
Sequence 2:NP_999899.1 Gene:prrx1a / 406431 ZFINID:ZDB-GENE-020905-5 Length:245 Species:Danio rerio


Alignment Length:170 Identity:61/170 - (35%)
Similarity:81/170 - (47%) Gaps:23/170 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   176 LSAAALRNVSAAQTTAVAAVASTVATIQHRLMIGNRQSLPPAGPPSEGSNEDGGFPGDGD----- 235
            |..|...|....|.....:|:..:...:.|.|:| .|:...||.......|..|.....|     
Zfish    19 LETAITANQDHLQAKKNFSVSHLLDLEEAREMVG-AQAEESAGEAGRSMLESPGLTSGSDTTQQE 82

  Fly   236 ------DDSSAAKRRRSRTNFNSWQLEELERAFSASHYPDIFMREALAMRLDLKESRVAVWFQNR 294
                  ::....|:||:||.|||.||:.|||.|..:||||.|:||.||.|::|.|:||.||||||
Zfish    83 NEQLNAEEKKKRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNR 147

  Fly   295 RAKVRKREHTKKGPGRPAHNAQ-PQTCSGE------PIPP 327
            |||.|:.|.....    :.||. .::.|||      ||.|
Zfish   148 RAKFRRNERAMLA----SKNASLLKSFSGEVTAVEQPIVP 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unc-4NP_573242.2 Homeodomain 244..300 CDD:459649 36/55 (65%)
prrx1aNP_999899.1 Homeodomain 101..153 CDD:459649 33/51 (65%)
OAR 220..237 CDD:461067
Blue background indicates that the domain is not in the aligned region.

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