DRSC/TRiP Functional Genomics Resources

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Protein Alignment unc-4 and Poxn

DIOPT Version :10

Sequence 1:NP_573242.2 Gene:unc-4 / 32757 FlyBaseID:FBgn0024184 Length:588 Species:Drosophila melanogaster
Sequence 2:NP_476686.1 Gene:Poxn / 36741 FlyBaseID:FBgn0003130 Length:425 Species:Drosophila melanogaster


Alignment Length:383 Identity:82/383 - (21%)
Similarity:107/383 - (27%) Gaps:133/383 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 DAASAGGHPNSAAAAAAATQMAAVNASNAFANLTGLSAAALRNVSAAQTTAVAAVASTVATIQHR 205
            :||:|      |||||||...|....||.:..........:...:.|.|.::|..|...|     
  Fly   145 NAAAA------AAAAAAAAHQAGSGPSNGYGGQAPPPPVTVAPPTPAATPSIARYAKPPA----- 198

  Fly   206 LMIGNRQSLP----PAGPPSEGSNEDGGFPGDGDDDSSAAKRRRSRTNFNSWQLEELERAFSASH 266
            ||:.:...:|    |..|||.|.....|.                  |.|   :..|:.::||.|
  Fly   199 LMMNSAGEMPIKPAPKMPPSMGHGHSHGL------------------NPN---VSGLDLSYSALH 242

  Fly   267 YPDIFMREALAMRLDLKESRVAVWFQNRRAKVRKREHTKKGPGRPAHNAQPQTCSGEPIPPNELK 331
                                 ..|..|.......:.|.:         ||.....|:.:|     
  Fly   243 ---------------------KHWLWNPSLLYYTQAHIQ---------AQAAASGGQFLP----- 272

  Fly   332 AKERARRRKKLAKAIDRQARKLQAKGITVDLEALKAEYISQHKANGTFSDS----DLEDDGIQID 392
                                  .|.|...  .|:.|...|...|.|.|:.|    ||...|...|
  Fly   273 ----------------------YAGGYLP--HAMAAAAASSTSALGGFTKSESSIDLSTPGAAGD 313

  Fly   393 VVGGTDSDDEGDSDAVSPVRLGGGGGGGGGTGGGGGGGASSS------------------LHCGL 439
            .:...||.....: |:|....|||.|.|.......|...|.|                  |..  
  Fly   314 ALSDCDSGKSSPA-ALSLTASGGGNGAGSAPEASPGSTLSHSRKRNPYSIEELLKKPEKRLRL-- 375

  Fly   440 DGDGDSSRAGSFIGGGGSLGSPSSVAPPSMLSNGAVQFGKLEPMDGNESEERDRERDS 497
                ||:|..............|.||||         ....|..|..|:||...|.||
  Fly   376 ----DSNRLECLESSSCESSQDSPVAPP---------LETPEDEDPAEAEEEQEEEDS 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unc-4NP_573242.2 Homeodomain 244..300 CDD:459649 8/55 (15%)
PoxnNP_476686.1 HTH_ARSR 5..133 CDD:481197
Blue background indicates that the domain is not in the aligned region.

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