DRSC/TRiP Functional Genomics Resources

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Protein Alignment unc-4 and bsh

DIOPT Version :10

Sequence 1:NP_573242.2 Gene:unc-4 / 32757 FlyBaseID:FBgn0024184 Length:588 Species:Drosophila melanogaster
Sequence 2:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster


Alignment Length:464 Identity:105/464 - (22%)
Similarity:154/464 - (33%) Gaps:174/464 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LTNNNNSSASRNNNSHNN----NNNNHSPKEIPE--ETGRSSSTSSNS---IPNAHRTNAGQHLL 69
            |..|.||:::.||:|..|    |.||::||....  ::.||:....|:   .|:.|......|..
  Fly    50 LFQNLNSASNNNNSSDTNGIAANTNNYAPKSSRNAVKSARSAFAHDNNPHKHPSQHSHPPQSHPP 114

  Fly    70 GGSPSSACSTSVS---GCGMPSE----GLHPT------------------AALQLYAAAAQ--LA 107
            ..:.:||.:|:.|   ..|...|    .:|.|                  .:.||.:.|||  ..
  Fly   115 ASASASATATARSNQAASGYAGEDYGKSMHSTPRSNHHSRHGTSHYNGDQISQQLGSGAAQHPPV 179

  Fly   108 PNGVRVPPWGPFLQFG---VPGVFGPNGPFLGRPRFDAASAGGHPNSAAAAAAATQMAAVNASNA 169
            |.....||..|.|..|   ..||..||.|:                               ..:.
  Fly   180 PTTQPQPPPPPPLNGGSGASNGVLYPNAPY-------------------------------TDHG 213

  Fly   170 FANLTGLSAAALRNVSAAQTTAVAAVASTVATIQHRLMIGNRQSLPP---------AGPPSEGSN 225
            |..:|      |..:|.:.                    |..:|:.|         .|.|..|: 
  Fly   214 FLQMT------LGYLSPSS--------------------GTYKSVDPYFLSQASLFGGAPFFGA- 251

  Fly   226 EDGGFP------GDGDDDSSAAKRRRSRTNFNSWQLEELERAFSASHYPDIFMREALAMRLDLKE 284
             .|..|      |.|.:.....:||::||.|:..||..||:.|....|.....|..||..|.|.|
  Fly   252 -PGCVPELALGLGMGVNALRHCRRRKARTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSE 315

  Fly   285 SRVAVWFQNRRAK----VRKREHTK-----------KGPGRPAHNA--------QPQTCSGEPIP 326
            ::|..||||||.|    :|:|::..           |.||....::        .|.:..|.|..
  Fly   316 TQVKTWFQNRRMKHKKQLRRRDNANEPVDFSRSEPGKQPGEATSSSGDSKHGKLNPGSVGGTPTQ 380

  Fly   327 PNELKAKERARRRKKLAKAIDRQARK-LQAKGITV----DLEALKAEYISQHKANGTFSDSDLED 386
            |..                 ::|.:. |..:|.:.    ||||                ||..||
  Fly   381 PTS-----------------EQQLQMCLMQQGYSTDDYSDLEA----------------DSGDED 412

  Fly   387 DGIQIDVVG 395
            :...:|:||
  Fly   413 NSSDVDIVG 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unc-4NP_573242.2 Homeodomain 244..300 CDD:459649 24/59 (41%)
bshNP_477350.2 Homeodomain 275..331 CDD:459649 24/55 (44%)

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