DRSC/TRiP Functional Genomics Resources

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Protein Alignment unc-4 and VSX1

DIOPT Version :10

Sequence 1:NP_573242.2 Gene:unc-4 / 32757 FlyBaseID:FBgn0024184 Length:588 Species:Drosophila melanogaster
Sequence 2:NP_055403.2 Gene:VSX1 / 30813 HGNCID:12723 Length:365 Species:Homo sapiens


Alignment Length:465 Identity:114/465 - (24%)
Similarity:159/465 - (34%) Gaps:178/465 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 TGRSSSTSSNSIPNAHRTNAGQHLLGGSPSSACSTSVSGCGMPSEGLHPT--AALQLYAAAAQL- 106
            |||.|.:..       ||::...:.||||               .|..|.  |...|....|:| 
Human     2 TGRDSLSDG-------RTSSRALVPGGSP---------------RGSRPRGFAITDLLGLEAELP 44

  Fly   107 APNGVRVPPWGPFLQFGVPGVFGPN-GPFLGRPRFDAASA---------------GGHPNSAAAA 155
            ||.|   |..|       .|..||. .|..| |..|.:|.               |..|.:||.|
Human    45 APAG---PGQG-------SGCEGPAVAPCPG-PGLDGSSLARGALPLGLGLLCGFGTQPPAAARA 98

  Fly   156 AAATQMAAVNASNAFANLTGLSAAALRNVSAAQTTAVAAVASTVATIQHRLMIGNRQSLPPAG-- 218
            ..                                                |::.:...|||.|  
Human    99 PC------------------------------------------------LLLADVPFLPPRGPE 115

  Fly   219 ----------PPSEGSNEDGGFPGDGDDDSSA--------------AKRRRSRTNFNSWQLEELE 259
                      ||:.|..:........|:||.:              .|:||.||.|.:.||||||
Human   116 PAAPLAPSRPPPALGRQKRSDSVSTSDEDSQSEDRNDLKASPTLGKRKKRRHRTVFTAHQLEELE 180

  Fly   260 RAFSASHYPDIFMREALAMRLDLKESRVAVWFQNRRAKVRKREHTKKGPGRPA----HNAQPQTC 320
            :|||.:||||::.||.||::.:|.|.|:.|||||||||.||||....|....|    :.|..:.|
Human   181 KAFSEAHYPDVYAREMLAVKTELPEDRIQVWFQNRRAKWRKREKRWGGSSVMAEYGLYGAMVRHC 245

  Fly   321 SGEPIPPNELKAKERA----------RRRKKLAKAIDRQARKLQAKGITVDLEALKAEYISQHKA 375
            .  |:|.:.|.:.|..          ...||....|.:...:.:..|:          :.|.|..
Human   246 I--PLPDSVLNSAEGGLLGSCAPWLLGMHKKSMGMIRKPGSEDKLAGL----------WGSDHFK 298

  Fly   376 NGTF---------SDSDLEDDGIQIDVVGGTDSDDEGDSDAVSPVRLGGGGGGGGGTGGGGGGGA 431
            .|:.         ||....::|:: ||.....|....::..|.|             |.|..||:
Human   299 EGSSQSESGSQRGSDKVSPENGLE-DVAIDLSSSARQETKKVHP-------------GAGAQGGS 349

  Fly   432 SSSLHCGLDG 441
            :|:   .|:|
Human   350 NST---ALEG 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unc-4NP_573242.2 Homeodomain 244..300 CDD:459649 34/55 (62%)
VSX1NP_055403.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..37 13/56 (23%)
Octapeptide motif 31..38 2/6 (33%)
PRK14959 <47..>149 CDD:184923 27/160 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 113..167 9/53 (17%)
Nuclear localization signal. /evidence=ECO:0000255 161..166 1/4 (25%)
Homeodomain 165..221 CDD:459649 34/55 (62%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 290..365 19/94 (20%)

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