DRSC/TRiP Functional Genomics Resources

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Protein Alignment unc-4 and rx1

DIOPT Version :10

Sequence 1:NP_573242.2 Gene:unc-4 / 32757 FlyBaseID:FBgn0024184 Length:588 Species:Drosophila melanogaster
Sequence 2:NP_571300.2 Gene:rx1 / 30472 ZFINID:ZDB-GENE-990415-236 Length:330 Species:Danio rerio


Alignment Length:163 Identity:53/163 - (32%)
Similarity:67/163 - (41%) Gaps:62/163 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   227 DGGFPGDGDDDSSAAKRRRSRTNFNSWQLEELERAFSASHYPDIFMREALAMRLDLKESRVAVWF 291
            |...|...|.:....|.||:||.|.::||.||||||..|||||::.||.|||:::|.|.||.|||
Zfish   121 DSKSPDSADGEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWF 185

  Fly   292 QNRRAKVRKRE----------------------HTKKGP-------------------------- 308
            ||||||.|::|                      |...||                          
Zfish   186 QNRRAKWRRQEKIDASTMKLHDSPMLSFNRPSMHPTVGPMNNSLPLDPWLPSPLSSATPVHSIPG 250

  Fly   309 ----------GRPAHN----AQPQTCSGEPIPP 327
                      |.|.|:    .||...|.:|:.|
Zfish   251 FMGPTQGLQTGYPGHSFLSPPQPMAQSMQPMAP 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unc-4NP_573242.2 Homeodomain 244..300 CDD:459649 36/55 (65%)
rx1NP_571300.2 Octapeptide motif 37..44
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 66..104
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 118..142 6/20 (30%)
Homeodomain 138..194 CDD:459649 36/55 (65%)
OAR 302..318 CDD:461067
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 306..319
Nuclear localization signal. /evidence=ECO:0000255 312..316
Blue background indicates that the domain is not in the aligned region.

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