DRSC/TRiP Functional Genomics Resources

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Protein Alignment unc-4 and Vsx1

DIOPT Version :10

Sequence 1:NP_573242.2 Gene:unc-4 / 32757 FlyBaseID:FBgn0024184 Length:588 Species:Drosophila melanogaster
Sequence 2:NP_473409.1 Gene:Vsx1 / 114889 MGIID:1890816 Length:363 Species:Mus musculus


Alignment Length:271 Identity:82/271 - (30%)
Similarity:115/271 - (42%) Gaps:65/271 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 LAPNGVRVPPWGPFLQ-FGVPGVFG-------PNGPFL----GRPRFDAASAGGHPNSAAAAAAA 158
            |||.   .||.|..|: |.:..:.|       |..|.|    |.|. :|..:|..|......:..
Mouse    17 LAPG---CPPTGSRLRSFAINDLLGLEADLPTPAEPGLRSNSGDPA-EAIGSGPGPGPGLCGSCP 77

  Fly   159 TQMAAVNASNAFANLTGLSAAALRNVSAAQTTAVAAVASTVATIQHRLMIGNRQSLPPAG----- 218
            .:.|           ..|....|....|...:|.||..:..      |::.:.:.||.||     
Mouse    78 ARGA-----------LPLGLGLLCGFGAQPPSAAAAARARC------LLLADLRLLPSAGPEPAV 125

  Fly   219 -------PPSEGSNE--------DGGFPGDGDDDSSAA------KRRRSRTNFNSWQLEELERAF 262
                   ||:.||.:        ||..|.:..:|...:      |:||.||.|.:.||||||:||
Mouse   126 AQGPVHPPPALGSQQRSESVSTSDGDSPSEEKNDPKMSLILGKRKKRRHRTVFTAHQLEELEKAF 190

  Fly   263 SASHYPDIFMREALAMRLDLKESRVAVWFQNRRAKVRKREHTKKGPGRPA----HNAQPQTCSGE 323
            ..:||||::.||.||.:.:|.|.|:.|||||||||.||||....|....|    :.|..:.|.  
Mouse   191 GEAHYPDVYAREMLAAKTELPEDRIQVWFQNRRAKWRKREKRWGGSSVMAEYGLYGAMVRHCI-- 253

  Fly   324 PIPPNELKAKE 334
            |:|.:.|.:.:
Mouse   254 PLPDSVLNSAD 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unc-4NP_573242.2 Homeodomain 244..300 CDD:459649 33/55 (60%)
Vsx1NP_473409.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..25 5/10 (50%)
Octapeptide motif 31..38 1/6 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 42..66 6/24 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 122..166 8/43 (19%)
Nuclear localization signal. /evidence=ECO:0000255 168..173 1/4 (25%)
Homeodomain 172..228 CDD:459649 33/55 (60%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 300..363
Blue background indicates that the domain is not in the aligned region.

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