DRSC/TRiP Functional Genomics Resources

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Protein Alignment unc-4 and nobox

DIOPT Version :10

Sequence 1:NP_573242.2 Gene:unc-4 / 32757 FlyBaseID:FBgn0024184 Length:588 Species:Drosophila melanogaster
Sequence 2:XP_031761569.1 Gene:nobox / 100494031 XenbaseID:XB-GENE-22068768 Length:652 Species:Xenopus tropicalis


Alignment Length:487 Identity:116/487 - (23%)
Similarity:155/487 - (31%) Gaps:160/487 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ETSEGDTKKFLTNNNNSSASRNNNSHNNNNNNHSPKEIPEETG-RSSSTSSNSIP----NAHRTN 63
            ||.....:|::.|       |............||.|  |||. |.....:...|    .|...|
 Frog    75 ETGPAQAEKWIRN-------RRQREDEKRCQLGSPDE--EETSLRCLEPEAGGGPQDEYRAVLIN 130

  Fly    64 AGQHLL--------GGSPSSACSTSVSGCGMPSE---GLHPTAALQLYAAAAQLAPNGVRVPPWG 117
            .|.:.|        |.:||..|::....|.:...   |..|.|....|:|.:...|.|       
 Frog   131 EGGNGLVASDPREFGINPSGGCASEGGQCQLSLLAVCGPLPEATGGCYSAFSGDDPQG------- 188

  Fly   118 PFLQFGVPGVFGPNGPFLGRPRFDAASAGGHPNSAAAAAAATQMAAVNASNAFANLTGLSAAALR 182
                   ||.|.|.|.|  :| .:....|..|.||.....:.:.||......|...||..     
 Frog   189 -------PGYFPPRGQF--QP-VNLKVEGNFPQSAPLPRRSARCAASCRLPTFIYDTGHG----- 238

  Fly   183 NVSAAQTTAVAAVASTVATIQHRLMIGNRQSLPPAGPPSEGSNEDGGFPGDGDDDSSAAKRRRSR 247
                                      |:||.              |..|.|..::.....|::||
 Frog   239 --------------------------GDRQR--------------GKCPADAPEEPGPPCRKKSR 263

  Fly   248 TNFNSWQLEELERAFSASHYPDIFMREALAMRLDLKESRVAVWFQNRRAKVRKREHTK-KGPGRP 311
            |.::..||:||||.|:..||||...|..:|..:.:...|:.|||||||||.||.|.|. |||.:|
 Frog   264 TLYSMDQLQELERLFAEDHYPDSEKRREIAEIIGVTPQRIMVWFQNRRAKWRKVEKTSIKGPRKP 328

  Fly   312 AHNAQPQTCSGEPIPPNELKAKERARRRKKLAKAIDRQARKLQAKGI----TVDLEALKAEYISQ 372
                                                     |.|.|:    |..|....:..:|:
 Frog   329 -----------------------------------------LSAAGMSRPETAVLTVSSSVALSR 352

  Fly   373 HKANGTFSDSDLEDDGIQIDVVGGTDSDDEGDSDAVSPVRLGGGGGGGGGTGGGGGGGASSSLHC 437
            .:|             :.:.|..|..:    ...|..||         ||...|......|:|..
 Frog   353 PEA-------------VSLSVTSGFHT----YGSAFPPV---------GGVRNGFSMVPGSALPT 391

  Fly   438 GLDGDGDSSRAGSFIGGGGSLGSPSSVA-PPS 468
            ....||.|..:.|.......|||||.|. |||
 Frog   392 SQSSDGSSQHSASCSSSSSGLGSPSEVCLPPS 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unc-4NP_573242.2 Homeodomain 244..300 CDD:459649 26/55 (47%)
noboxXP_031761569.1 Homeodomain 260..316 CDD:459649 26/55 (47%)

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